Literature DB >> 14595685

Rice proteomics: current status and future perspectives.

Randeep Rakwal1, Ganesh Kumar Agrawal.   

Abstract

Rice, the first cereal crop genome to be decoded, has attracted the attention of researchers worldwide because of its immense socio-economic impact on human existence. With the availability of the draft genome sequence of two major types, japonica- and indica-rice, "rice proteomics" has entered into the era of functional genomics. Although during the last decade an important but limited progress (mainly construction of protein datafiles) has been made in the field of rice proteomics, it is only recently that dedicated research groups have taken this challenge to systematically analyze the rice proteome at the cell (and organelle), tissue, and whole plant level. Important gains achieved by the accelerated technological progress in protein separation and identification will help in going beyond the simple cataloguing of rice proteins in realistic terms. In this review, we discuss the progress made in the field of rice proteomics to date and dwell upon the future direction/problems/approaches towards defining the rice proteome.

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Year:  2003        PMID: 14595685     DOI: 10.1002/elps.200305586

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  11 in total

1.  A systemic proteomic analysis of Populus chloroplast by using shotgun method.

Authors:  Hong-Mei Yuan; Kai-Long Li; Rui-Juan Ni; Wen-Dong Guo; Zhuo Shen; Chuan-Ping Yang; Bai-Chen Wang; Gui-Feng Liu; Chang-Hong Guo; Jing Jiang
Journal:  Mol Biol Rep       Date:  2010-02-05       Impact factor: 2.316

2.  Shotgun Quantitative Proteomic Analysis of Proteins Responding to Drought Stress in Brassica rapa L. (Inbred Line "Chiifu").

Authors:  Soon-Wook Kwon; Mijeong Kim; Hijin Kim; Joohyun Lee
Journal:  Int J Genomics       Date:  2016-06-21       Impact factor: 2.326

Review 3.  Cereal Crop Proteomics: Systemic Analysis of Crop Drought Stress Responses Towards Marker-Assisted Selection Breeding.

Authors:  Arindam Ghatak; Palak Chaturvedi; Wolfram Weckwerth
Journal:  Front Plant Sci       Date:  2017-06-02       Impact factor: 5.753

4.  Proteo-metabolomic investigation of transgenic rice unravels metabolic alterations and accumulation of novel proteins potentially involved in defence against Rhizoctonia solani.

Authors:  Subhasis Karmakar; Karabi Datta; Kutubuddin Ali Molla; Dipak Gayen; Kaushik Das; Sailendra Nath Sarkar; Swapan K Datta
Journal:  Sci Rep       Date:  2019-07-18       Impact factor: 4.379

Review 5.  Plants versus fungi and oomycetes: pathogenesis, defense and counter-defense in the proteomics era.

Authors:  Abdelbasset El Hadrami; Ahmed F El-Bebany; Zhen Yao; Lorne R Adam; Ismail El Hadrami; Fouad Daayf
Journal:  Int J Mol Sci       Date:  2012-06-13       Impact factor: 6.208

6.  Rice molecular breeding laboratories in the genomics era: Current status and future considerations.

Authors:  Bert C Y Collard; Casiana M Vera Cruz; Kenneth L McNally; Parminder S Virk; David J Mackill
Journal:  Int J Plant Genomics       Date:  2008

7.  Proteomics of rice seed germination.

Authors:  Dongli He; Pingfang Yang
Journal:  Front Plant Sci       Date:  2013-07-09       Impact factor: 5.753

8.  Using a periclinal chimera to unravel layer-specific gene expression in plants.

Authors:  Ioannis Filippis; Rosa Lopez-Cobollo; James Abbott; Sarah Butcher; Gerard J Bishop
Journal:  Plant J       Date:  2013-07-19       Impact factor: 6.417

9.  Ascribing Functions to Genes: Journey Towards Genetic Improvement of Rice Via Functional Genomics.

Authors:  Ananda Mustafiz; Sumita Kumari; Ratna Karan
Journal:  Curr Genomics       Date:  2016-06       Impact factor: 2.236

10.  Complementary RNA-Sequencing Based Transcriptomics and iTRAQ Proteomics Reveal the Mechanism of the Alleviation of Quinclorac Stress by Salicylic Acid in Oryza sativa ssp. japonica.

Authors:  Jian Wang; Faisal Islam; Lan Li; Meijuan Long; Chong Yang; Xiaoli Jin; Basharat Ali; Bizeng Mao; Weijun Zhou
Journal:  Int J Mol Sci       Date:  2017-09-14       Impact factor: 5.923

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