Literature DB >> 14595015

Gene expression patterns in human embryonic stem cells and human pluripotent germ cell tumors.

Jamie M Sperger1, Xin Chen, Jonathan S Draper, Jessica E Antosiewicz, Chris H Chon, Sunita B Jones, James D Brooks, Peter W Andrews, Patrick O Brown, James A Thomson.   

Abstract

Remarkably little is known about the transcriptional profiles of human embryonic stem (ES) cells or the molecular mechanisms that underlie their pluripotency. To identify commonalties among the transcriptional profiles of different human pluripotent cells and to search for clues into the genesis of human germ cell tumors, we compared the expression profiles of human ES cell lines, human germ cell tumor cell lines and tumor samples, somatic cell lines, and testicular tissue samples by using cDNA microarray analysis. Hierarchical cluster analysis of gene expression profiles showed that the five independent human ES cell lines clustered tightly together, reflecting highly similar expression profiles. The gene expression patterns of human ES cell lines showed many similarities with the human embryonal carcinoma cell samples and more distantly with the seminoma samples. We identified 895 genes that were expressed at significantly greater levels in human ES and embryonal carcinoma cell lines than in control samples. These genes are candidates for involvement in the maintenance of a pluripotent, undifferentiated phenotype.

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Year:  2003        PMID: 14595015      PMCID: PMC263817          DOI: 10.1073/pnas.2235735100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

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Authors:  Ian Chambers; Douglas Colby; Morag Robertson; Jennifer Nichols; Sonia Lee; Susan Tweedie; Austin Smith
Journal:  Cell       Date:  2003-05-30       Impact factor: 41.582

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Authors:  Noboru Sato; Ignacio Munoz Sanjuan; Michael Heke; Makiko Uchida; Felix Naef; Ali H Brivanlou
Journal:  Dev Biol       Date:  2003-08-15       Impact factor: 3.582

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6.  A human embryonal-yolk sac carcinoma model system in athymic mice.

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Journal:  Cancer       Date:  1985-06-01       Impact factor: 6.860

7.  Four new human germ cell tumor cell lines.

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Journal:  Lab Invest       Date:  1988-09       Impact factor: 5.662

8.  The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells.

Authors:  Kaoru Mitsui; Yoshimi Tokuzawa; Hiroaki Itoh; Kohichi Segawa; Mirei Murakami; Kazutoshi Takahashi; Masayoshi Maruyama; Mitsuyo Maeda; Shinya Yamanaka
Journal:  Cell       Date:  2003-05-30       Impact factor: 41.582

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Authors:  P W Andrews
Journal:  Biochim Biophys Acta       Date:  1988-08-03

10.  Octamer binding proteins confer transcriptional activity in early mouse embryogenesis.

Authors:  H R Schöler; R Balling; A K Hatzopoulos; N Suzuki; P Gruss
Journal:  EMBO J       Date:  1989-09       Impact factor: 11.598

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  215 in total

1.  COMMD1 disrupts HIF-1alpha/beta dimerization and inhibits human tumor cell invasion.

Authors:  Bart van de Sluis; Xicheng Mao; Yali Zhai; Arjan J Groot; Jeroen F Vermeulen; Elsken van der Wall; Paul J van Diest; Marten H Hofker; Cisca Wijmenga; Leo W Klomp; Kathleen R Cho; Eric R Fearon; Marc Vooijs; Ezra Burstein
Journal:  J Clin Invest       Date:  2010-05-10       Impact factor: 14.808

2.  Histological evidence for the existence of germ cell tumor cells showing embryonal carcinoma morphology but lacking OCT4 expression and cisplatin sensitivity.

Authors:  Thomas Mueller; Lutz Peter Mueller; Hans-Juergen Holzhausen; Ralf Witthuhn; Peter Albers; Hans-Joachim Schmoll
Journal:  Histochem Cell Biol       Date:  2010-06-08       Impact factor: 4.304

3.  c-Myc controls the balance between hematopoietic stem cell self-renewal and differentiation.

Authors:  Anne Wilson; Mark J Murphy; Thordur Oskarsson; Konstantinos Kaloulis; Michael D Bettess; Gabriela M Oser; Anne-Catherine Pasche; Christian Knabenhans; H Robson Macdonald; Andreas Trumpp
Journal:  Genes Dev       Date:  2004-11-15       Impact factor: 11.361

4.  Rare cell proteomic reactor applied to stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative proteomics study of human embryonic stem cell differentiation.

Authors:  Ruijun Tian; Shuai Wang; Fred Elisma; Li Li; Hu Zhou; Lisheng Wang; Daniel Figeys
Journal:  Mol Cell Proteomics       Date:  2010-06-08       Impact factor: 5.911

Review 5.  Complement activation in the context of stem cells and tissue repair.

Authors:  Ingrid U Schraufstatter; Sophia K Khaldoyanidi; Richard G DiScipio
Journal:  World J Stem Cells       Date:  2015-09-26       Impact factor: 5.326

Review 6.  Phosphoproteomic analysis: an emerging role in deciphering cellular signaling in human embryonic stem cells and their differentiated derivatives.

Authors:  Brian T D Tobe; Junjie Hou; Andrew M Crain; Ilyas Singec; Evan Y Snyder; Laurence M Brill
Journal:  Stem Cell Rev Rep       Date:  2012-03       Impact factor: 5.739

7.  Fbxl10 overexpression in murine hematopoietic stem cells induces leukemia involving metabolic activation and upregulation of Nsg2.

Authors:  Takeshi Ueda; Akiko Nagamachi; Keiyo Takubo; Norimasa Yamasaki; Hirotaka Matsui; Akinori Kanai; Yuichiro Nakata; Kenichiro Ikeda; Takaaki Konuma; Hideaki Oda; Linda Wolff; Zen-ichiro Honda; Xudong Wu; Kristian Helin; Atsushi Iwama; Toshio Suda; Toshiya Inaba; Hiroaki Honda
Journal:  Blood       Date:  2015-04-14       Impact factor: 22.113

8.  Self-renewal of human embryonic stem cells requires insulin-like growth factor-1 receptor and ERBB2 receptor signaling.

Authors:  Linlin Wang; Thomas C Schulz; Eric S Sherrer; Derek S Dauphin; Soojung Shin; Angelique M Nelson; Carol B Ware; Mei Zhan; Chao-Zhong Song; Xiaoji Chen; Sandii N Brimble; Amanda McLean; Maria J Galeano; Elizabeth W Uhl; Kevin A D'Amour; Jonathan D Chesnut; Mahendra S Rao; C Anthony Blau; Allan J Robins
Journal:  Blood       Date:  2007-08-29       Impact factor: 22.113

Review 9.  The stem cell identity of testicular cancer.

Authors:  Amander T Clark
Journal:  Stem Cell Rev       Date:  2007-01       Impact factor: 5.739

10.  Differential expression of epigenetic modulators during human embryonic stem cell differentiation.

Authors:  Sharla M O Phipps; William K Love; Troy E Mott; Lucy G Andrews; Trygve O Tollefsbol
Journal:  Mol Biotechnol       Date:  2008-10-25       Impact factor: 2.695

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