Literature DB >> 14583788

TIMP-1 enhancer sequence--real or bacterial?

I M Clark, D A Young, D R Edwards.   

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Year:  2003        PMID: 14583788      PMCID: PMC2394415          DOI: 10.1038/sj.bjc.6601353

Source DB:  PubMed          Journal:  Br J Cancer        ISSN: 0007-0920            Impact factor:   7.640


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Sir, We have read with interest the recent paper in the British Journal of Cancer (Wang ). Our groups have worked on TIMP-1 gene regulation for a number of years, including a dissection of the gene promoter in both human and mouse. The 18 bp HTE-1 enhancer element used in this paper (and others referenced therein) is described to be in intron 1 of the human TIMP-1 gene. However, a search of sequences from our own human and mouse TIMP-1 genomic clones, or indeed a BLAST into the human genomic sequence databases, including the X-chromosome sequences containing the TIMP-1 gene, do not reveal a perfect match for HTE-1. The best match in the human genome, for the first 16 base pairs of HTE-1, is in chromosome 17 (though outside of the TIMP-2 gene which lies on this chromosome). It is with some concern that we note that the HTE-1 sequence is matched in its entirety within the E. coli genome. The authors have cloned an IL-10-responsive DNA-binding protein on the basis of its binding to the HTE-1 sequence, and explored its function. However, the interpretation of the data demonstrating that overexpression of the HTE-1-binding protein induces TIMP-1 expression (Figure 11) is made more difficult if the HTE-1 sequence is not within the TIMP-1 gene. We would very much welcome the authors' input on these matters.
  1 in total

1.  A novel IL-10 signalling mechanism regulates TIMP-1 expression in human prostate tumour cells.

Authors:  M Wang; Y Hu; M E Stearns
Journal:  Br J Cancer       Date:  2003-05-19       Impact factor: 7.640

  1 in total

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