Literature DB >> 14583024

Glycine on a wet pyrite surface at extreme conditions.

Christian Boehme1, Dominik Marx.   

Abstract

We present ab initio molecular dynamics (MD) simulations of the simplest amino acid, glycine, at the water/pyrite interface under extreme pressure/temperature conditions. These simulations are aimed to contribute to the discussion of the "iron-sulfur world" (ISW) scenario, an intriguing proposal in the controversial field of "Origin of Life" research. The simulations show that glycine easily desorbs from a water/pyrite interface through hydrogen-bond assistance. The retention time is only of the order of a picosecond, and the surface bonding is best understood as a relatively weak electrostatic interaction. However, we have found indications of glycine activation due to the interaction with the surface, and thus for a possible reaction with a suitable anchor molecule.

Entities:  

Year:  2003        PMID: 14583024     DOI: 10.1021/ja0359714

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

Review 1.  Adsorption and polymerization of amino acids on mineral surfaces: a review.

Authors:  Jean-François Lambert
Journal:  Orig Life Evol Biosph       Date:  2008-03-15       Impact factor: 1.950

2.  Ab initio simulations of desorption and reactivity of glycine at a water-pyrite interface at "iron-sulfur world" prebiotic conditions.

Authors:  Rodolphe Pollet; Christian Boehme; Dominik Marx
Journal:  Orig Life Evol Biosph       Date:  2006-03-30       Impact factor: 1.950

3.  Energetic selection of topology in ferredoxins.

Authors:  J Dongun Kim; Agustina Rodriguez-Granillo; David A Case; Vikas Nanda; Paul G Falkowski
Journal:  PLoS Comput Biol       Date:  2012-04-05       Impact factor: 4.475

Review 4.  Tracing the Primordial Chemical Life of Glycine: A Review from Quantum Chemical Simulations.

Authors:  Albert Rimola; Nadia Balucani; Cecilia Ceccarelli; Piero Ugliengo
Journal:  Int J Mol Sci       Date:  2022-04-12       Impact factor: 6.208

5.  Formation versus hydrolysis of the peptide bond from a quantum-mechanical viewpoint: The role of mineral surfaces and implications for the origin of life.

Authors:  Albert Rimola; Piero Ugliengo; Mariona Sodupe
Journal:  Int J Mol Sci       Date:  2009-02-26       Impact factor: 5.923

6.  Size-Dependent Affinity of Glycine and Its Short Oligomers to Pyrite Surface: A Model for Prebiotic Accumulation of Amino Acid Oligomers on a Mineral Surface.

Authors:  Rehana Afrin; Narangerel Ganbaatar; Masashi Aono; H James Cleaves Ii; Taka-Aki Yano; Masahiko Hara
Journal:  Int J Mol Sci       Date:  2018-01-25       Impact factor: 5.923

7.  L-Lysine Amino Acid Adsorption on Zeolite L: a Combined Synchrotron, X-Ray and Neutron Diffraction Study.

Authors:  Giada Beltrami; Annalisa Martucci; Luisa Pasti; Tatiana Chenet; Matteo Ardit; Lara Gigli; Mirco Cescon; Emmanuelle Suard
Journal:  ChemistryOpen       Date:  2020-09-24       Impact factor: 2.630

  7 in total

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