Literature DB >> 14573474

A family of genes clustered at the Triplo-lethal locus of Drosophila melanogaster has an unusual evolutionary history and significant synteny with Anopheles gambiae.

Douglas R Dorer1, Jamie A Rudnick, Etsuko N Moriyama, Alan C Christensen.   

Abstract

Within the unique Triplo-lethal region (Tpl) of the Drosophila melanogaster genome we have found a cluster of 20 genes encoding a novel family of proteins. This family is also present in the Anopheles gambiae genome and displays remarkable synteny and sequence conservation with the Drosophila cluster. The family is also present in the sequenced genome of D. pseudoobscura, and homologs have been found in Aedes aegypti mosquitoes and in four other insect orders, but it is not present in the sequenced genome of any noninsect species. Phylogenetic analysis suggests that the cluster evolved prior to the divergence of Drosophila and Anopheles (250 MYA) and has been highly conserved since. The ratio of synonymous to nonsynonymous substitutions and the high codon bias suggest that there has been selection on this family both for expression level and function. We hypothesize that this gene family is Tpl, name it the Osiris family, and consider possible functions. We also predict that this family of proteins, due to the unique dosage sensitivity and the lack of homologs in noninsect species, would be a good target for genetic engineering or novel insecticides.

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Mesh:

Year:  2003        PMID: 14573474      PMCID: PMC1462804     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  37 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Use of subtracted libraries and macroarray to isolate developmentally specific genes from the mosquito, Aedes aegypti.

Authors:  Kendall C Krebs; Kristina L Brzoza; Que Lan
Journal:  Insect Biochem Mol Biol       Date:  2002-12       Impact factor: 4.714

Review 3.  Evolution of synonymous codon usage in metazoans.

Authors:  Laurent Duret
Journal:  Curr Opin Genet Dev       Date:  2002-12       Impact factor: 5.578

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Mutational Events in the Triplo- and Haplo-Lethal Region (83de) of the DROSOPHILA MELANOGASTER Genome.

Authors:  R L Roehrdanz; J C Lucchesi
Journal:  Genetics       Date:  1980-06       Impact factor: 4.562

6.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.

Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

7.  The unusual spectrum of mutations induced by hybrid dysgenesis at the Triplo-lethal locus of Drosophila melanogaster.

Authors:  D R Dorer; A C Christensen
Journal:  Genetics       Date:  1990-08       Impact factor: 4.562

8.  Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.

Authors:  H Akashi
Journal:  Genetics       Date:  1994-03       Impact factor: 4.562

9.  The Berkeley Drosophila Genome Project gene disruption project: Single P-element insertions mutating 25% of vital Drosophila genes.

Authors:  A C Spradling; D Stern; A Beaton; E J Rhem; T Laverty; N Mozden; S Misra; G M Rubin
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

10.  Gene expression during the life cycle of Drosophila melanogaster.

Authors:  Michelle N Arbeitman; Eileen E M Furlong; Farhad Imam; Eric Johnson; Brian H Null; Bruce S Baker; Mark A Krasnow; Matthew P Scott; Ronald W Davis; Kevin P White
Journal:  Science       Date:  2002-09-27       Impact factor: 47.728

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  30 in total

1.  Gene expression during Drosophila wing morphogenesis and differentiation.

Authors:  Nan Ren; Chunming Zhu; Haeryun Lee; Paul N Adler
Journal:  Genetics       Date:  2005-07-05       Impact factor: 4.562

2.  Characteristics of molecular-genetic organization of intercalary heterochromatin band 10A1-2 in X chromosome of Drosophila melanogaster.

Authors:  V N Babenko; G V Pokholkova; E B Kokoza; N G Andreyenkova; S N Belyakin; E S Belyaeva; I F Zhimulev
Journal:  Dokl Biochem Biophys       Date:  2009 Jan-Feb       Impact factor: 0.788

Review 3.  Intercalary heterochromatin in polytene chromosomes of Drosophila melanogaster.

Authors:  E S Belyaeva; E N Andreyeva; S N Belyakin; E I Volkova; I F Zhimulev
Journal:  Chromosoma       Date:  2008-05-20       Impact factor: 4.316

4.  The Drosophila gene disruption project: progress using transposons with distinctive site specificities.

Authors:  Hugo J Bellen; Robert W Levis; Yuchun He; Joseph W Carlson; Martha Evans-Holm; Eunkyung Bae; Jaeseob Kim; Athanasios Metaxakis; Charalambos Savakis; Karen L Schulze; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

5.  Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories.

Authors:  Stepan N Belyakin; George K Christophides; Artyom A Alekseyenko; Evgenia V Kriventseva; Elena S Belyaeva; Roman A Nanayev; Igor V Makunin; Fotis C Kafatos; Igor F Zhimulev
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-31       Impact factor: 11.205

6.  Genetic basis of octanoic acid resistance in Drosophila sechellia: functional analysis of a fine-mapped region.

Authors:  J M Andrade López; S M Lanno; J M Auerbach; E C Moskowitz; L A Sligar; P J Wittkopp; J D Coolon
Journal:  Mol Ecol       Date:  2017-02-04       Impact factor: 6.185

7.  Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes.

Authors:  Arjun Bhutkar; Stephen W Schaeffer; Susan M Russo; Mu Xu; Temple F Smith; William M Gelbart
Journal:  Genetics       Date:  2008-07-13       Impact factor: 4.562

8.  Genomic analysis of a sexually-selected character: EST sequencing and microarray analysis of eye-antennal imaginal discs in the stalk-eyed fly Teleopsis dalmanni (Diopsidae).

Authors:  Richard H Baker; Jenna Morgan; Xianhui Wang; Jeffrey L Boore; Gerald S Wilkinson
Journal:  BMC Genomics       Date:  2009-08-05       Impact factor: 3.969

9.  A locus in Drosophila sechellia affecting tolerance of a host plant toxin.

Authors:  Eric A Hungate; Eric J Earley; Ian A Boussy; David A Turissini; Chau-Ti Ting; Jennifer R Moran; Mao-Lien Wu; Chung-I Wu; Corbin D Jones
Journal:  Genetics       Date:  2013-09-13       Impact factor: 4.562

10.  Negative regulation of the novel norpA(P24) suppressor, diehard4, in the endo-lysosomal trafficking underlies photoreceptor cell degeneration.

Authors:  Jongwoo Lee; Myungchul Song; Sujeong Hong
Journal:  PLoS Genet       Date:  2013-06-06       Impact factor: 5.917

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