Literature DB >> 14559095

Targeting metalloenzymes: a strategy that works.

Richard J White1, Peter S Margolis, Joaquim Trias, Zhengyu Yuan.   

Abstract

Faced with a wealth of antibacterial drug discovery targets as a result of bacterial genomics, we need to carefully select which ones to work with. Choosing bacterial metalloenzymes is one possible approach that can increase the probability of success. Metalloenzymes can be identified through specific motif searches of bacterial genomes. Current state-of-the-art medicinal chemistry allows for the design of inhibitor libraries targeting metalloenzymes and the efficient optimization of leads identified. This approach has been successfully applied to the discovery of in vivo active antibacterial agents that are inhibitors of bacterial peptide deformylase and UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase. Other bacterial metalloenzymes are open to the same approach.

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Year:  2003        PMID: 14559095     DOI: 10.1016/s1471-4892(03)00115-2

Source DB:  PubMed          Journal:  Curr Opin Pharmacol        ISSN: 1471-4892            Impact factor:   5.547


  13 in total

1.  Identifying chelators for metalloprotein inhibitors using a fragment-based approach.

Authors:  Jennifer A Jacobsen; Jessica L Fullagar; Melissa T Miller; Seth M Cohen
Journal:  J Med Chem       Date:  2010-12-28       Impact factor: 7.446

2.  Crystallization and preliminary X-ray crystallographic analysis of peptide deformylase (PDF) from Bacillus cereus in ligand-free and actinonin-bound forms.

Authors:  Joon Kyu Park; Jin Ho Moon; Jae-Hong Kim; Eunice EunKyeong Kim
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2004-12-24

3.  Examination of mechanism of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase (MshB) reveals unexpected role for dynamic tyrosine.

Authors:  Xinyi Huang; Marcy Hernick
Journal:  J Biol Chem       Date:  2012-02-07       Impact factor: 5.157

4.  A slow, tight-binding inhibitor of the zinc-dependent deacetylase LpxC of lipid A biosynthesis with antibiotic activity comparable to ciprofloxacin.

Authors:  Amanda L McClerren; Stephanie Endsley; Jason L Bowman; Niels H Andersen; Ziqiang Guan; Johannes Rudolph; Christian R H Raetz
Journal:  Biochemistry       Date:  2005-12-20       Impact factor: 3.162

5.  Study of interactions between metal ions and protein model compounds by energy decomposition analyses and the AMOEBA force field.

Authors:  Zhifeng Jing; Rui Qi; Chengwen Liu; Pengyu Ren
Journal:  J Chem Phys       Date:  2017-10-28       Impact factor: 3.488

6.  Structural and functional studies of vertebrate metallothioneins: cross-talk between domains in the absence of physical contact.

Authors:  Clemente Capasso; Vincenzo Carginale; Orlando Crescenzi; Daniela Di Maro; Roberta Spadaccini; Piero Andrea Temussi; Elio Parisi
Journal:  Biochem J       Date:  2005-10-01       Impact factor: 3.857

7.  Active site metal ion in UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase (LpxC) switches between Fe(II) and Zn(II) depending on cellular conditions.

Authors:  Samuel G Gattis; Marcy Hernick; Carol A Fierke
Journal:  J Biol Chem       Date:  2010-08-13       Impact factor: 5.157

8.  The activity and cofactor preferences of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase (MshB) change depending on environmental conditions.

Authors:  Xinyi Huang; Evren Kocabas; Marcy Hernick
Journal:  J Biol Chem       Date:  2011-04-20       Impact factor: 5.157

9.  Structure-Activity Relationships in Metal-Binding Pharmacophores for Influenza Endonuclease.

Authors:  Cy V Credille; Benjamin L Dick; Christine N Morrison; Ryjul W Stokes; Rebecca N Adamek; Nicholas C Wu; Ian A Wilson; Seth M Cohen
Journal:  J Med Chem       Date:  2018-10-31       Impact factor: 7.446

10.  Residue ionization in LpxC directly observed by 67Zn NMR spectroscopy.

Authors:  Andrew S Lipton; Robert W Heck; Marcy Hernick; Carol A Fierke; Paul D Ellis
Journal:  J Am Chem Soc       Date:  2008-08-30       Impact factor: 15.419

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