Literature DB >> 14555691

The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks.

Anthony Hall1, Ruth M Bastow, Seth J Davis, Shigeru Hanano, Harriet G McWatters, Victoria Hibberd, Mark R Doyle, Sibum Sung, Karen J Halliday, Richard M Amasino, Andrew J Millar.   

Abstract

Plants synchronize developmental and metabolic processes with the earth's 24-h rotation through the integration of circadian rhythms and responses to light. We characterize the time for coffee (tic) mutant that disrupts circadian gating, photoperiodism, and multiple circadian rhythms, with differential effects among rhythms. TIC is distinct in physiological functions and genetic map position from other rhythm mutants and their homologous loci. Detailed rhythm analysis shows that the chlorophyll a/b-binding protein gene expression rhythm requires TIC function in the mid to late subjective night, when human activity may require coffee, in contrast to the function of EARLY-FLOWERING3 (ELF3) in the late day to early night. tic mutants misexpress genes that are thought to be critical for circadian timing, consistent with our functional analysis. Thus, we identify TIC as a regulator of the clock gene circuit. In contrast to tic and elf3 single mutants, tic elf3 double mutants are completely arrhythmic. Even the robust circadian clock of plants cannot function with defects at two different phases.

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Year:  2003        PMID: 14555691      PMCID: PMC280574          DOI: 10.1105/tpc.013730

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  45 in total

1.  Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis.

Authors:  R Schaffer; J Landgraf; M Accerbi; V Simon; M Larson; E Wisman
Journal:  Plant Cell       Date:  2001-01       Impact factor: 11.277

2.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

3.  EARLY FLOWERING3 encodes a novel protein that regulates circadian clock function and flowering in Arabidopsis.

Authors:  K A Hicks; T M Albertson; D R Wagner
Journal:  Plant Cell       Date:  2001-06       Impact factor: 11.277

4.  Functional independence of circadian clocks that regulate plant gene expression.

Authors:  S C Thain; A Hall; A J Millar
Journal:  Curr Biol       Date:  2000-08-24       Impact factor: 10.834

5.  ELF3 modulates resetting of the circadian clock in Arabidopsis.

Authors:  M F Covington; S Panda; X L Liu; C A Strayer; D R Wagner; S A Kay
Journal:  Plant Cell       Date:  2001-06       Impact factor: 11.277

6.  ELF3 encodes a circadian clock-regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway.

Authors:  X L Liu; M F Covington; C Fankhauser; J Chory; D R Wagner
Journal:  Plant Cell       Date:  2001-06       Impact factor: 11.277

7.  The ELF3 zeitnehmer regulates light signalling to the circadian clock.

Authors:  H G McWatters; R M Bastow; A Hall; A J Millar
Journal:  Nature       Date:  2000-12-07       Impact factor: 49.962

8.  Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog.

Authors:  C Strayer; T Oyama; T F Schultz; R Raman; D E Somers; P Más; S Panda; J A Kreps; S A Kay
Journal:  Science       Date:  2000-08-04       Impact factor: 47.728

9.  Independent action of ELF3 and phyB to control hypocotyl elongation and flowering time.

Authors:  J W Reed; P Nagpal; R M Bastow; K S Solomon; M J Dowson-Day; R P Elumalai; A J Millar
Journal:  Plant Physiol       Date:  2000-04       Impact factor: 8.340

10.  poc1: an Arabidopsis mutant perturbed in phytochrome signaling because of a T DNA insertion in the promoter of PIF3, a gene encoding a phytochrome-interacting bHLH protein.

Authors:  K J Halliday; M Hudson; M Ni; M Qin; P H Quail
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

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  77 in total

Review 1.  Plant circadian rhythms.

Authors:  C Robertson McClung
Journal:  Plant Cell       Date:  2006-04       Impact factor: 11.277

2.  Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis.

Authors:  Gang Li; Hamad Siddiqui; Yibo Teng; Rongcheng Lin; Xiang-yuan Wan; Jigang Li; On-Sun Lau; Xinhao Ouyang; Mingqiu Dai; Jianmin Wan; Paul F Devlin; Xing Wang Deng; Haiyang Wang
Journal:  Nat Cell Biol       Date:  2011-04-17       Impact factor: 28.824

3.  Proteomic analysis reveals O-GlcNAc modification on proteins with key regulatory functions in Arabidopsis.

Authors:  Shou-Ling Xu; Robert J Chalkley; Jason C Maynard; Wenfei Wang; Weimin Ni; Xiaoyue Jiang; Kihye Shin; Ling Cheng; Dasha Savage; Andreas F R Hühmer; Alma L Burlingame; Zhi-Yong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-02       Impact factor: 11.205

4.  Interaction of Arabidopsis DET1 with CCA1 and LHY in mediating transcriptional repression in the plant circadian clock.

Authors:  On Sun Lau; Xi Huang; Jean-Benoit Charron; Jae-Hoon Lee; Gang Li; Xing Wang Deng
Journal:  Mol Cell       Date:  2011-09-02       Impact factor: 17.970

Review 5.  Abiotic stress and the plant circadian clock.

Authors:  Alfredo Sanchez; Jieun Shin; Seth J Davis
Journal:  Plant Signal Behav       Date:  2011-02-01

Review 6.  Circadian oscillator proteins across the kingdoms of life: structural aspects.

Authors:  Reena Saini; Mariusz Jaskolski; Seth J Davis
Journal:  BMC Biol       Date:  2019-02-18       Impact factor: 7.431

7.  Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis.

Authors:  Sunghyun Hong; Sun A Kim; Mary Lou Guerinot; C Robertson McClung
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

8.  FIONA1 is essential for regulating period length in the Arabidopsis circadian clock.

Authors:  Jeongsik Kim; Yumi Kim; Miji Yeom; Jin-Hee Kim; Hong Gil Nam
Journal:  Plant Cell       Date:  2008-02-15       Impact factor: 11.277

9.  Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering.

Authors:  Jing-Fen Wu; Ying Wang; Shu-Hsing Wu
Journal:  Plant Physiol       Date:  2008-08-01       Impact factor: 8.340

10.  Recent advances in computational modeling as a conduit to understand the plant circadian clock.

Authors:  Jieun Shin; Seth J Davis
Journal:  F1000 Biol Rep       Date:  2010-07-14
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