Literature DB >> 14552578

Unsupervised robust nonparametric estimation of the hemodynamic response function for any fMRI experiment.

Philippe Ciuciu1, Jean-Baptiste Poline, Guillaume Marrelec, Jérôme Idier, Christophe Pallier, Habib Benali.   

Abstract

This paper deals with the estimation of the blood oxygen level-dependent response to a stimulus, as measured in functional magnetic resonance imaging (fMRI) data. A precise estimation is essential for a better understanding of cerebral activations. The most recent works have used a nonparametric framework for this estimation, considering each brain region as a system characterized by its impulse response, the so-called hemodynamic response function (HRF). However, the use of these techniques has remained limited since they are not well-adapted to real fMRI data. Here, we develop a threefold extension to previous works. We consider asynchronous event-related paradigms, account for different trial types and integrate several fMRI sessions into the estimation. These generalizations are simultaneously addressed through a badly conditioned observation model. Bayesian formalism is used to model temporal prior information of the underlying physiological process of the brain hemodynamic response. By this way, the HRF estimate results from a tradeoff between information brought by the data and by our prior knowledge. This tradeoff is modeled with hyperparameters that are set to the maximum-likelihood estimate using an expectation conditional maximization algorithm. The proposed unsupervised approach is validated on both synthetic and real fMRI data, the latter originating from a speech perception experiment.

Entities:  

Mesh:

Year:  2003        PMID: 14552578     DOI: 10.1109/TMI.2003.817759

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  13 in total

Review 1.  Connectivity-based parcellation: Critique and implications.

Authors:  Simon B Eickhoff; Bertrand Thirion; Gaël Varoquaux; Danilo Bzdok
Journal:  Hum Brain Mapp       Date:  2015-09-27       Impact factor: 5.038

2.  Extraction of cognitive activity-related waveforms from functional near-infrared spectroscopy signals.

Authors:  Ceyhun Burak Akgül; Ata Akin; Bülent Sankur
Journal:  Med Biol Eng Comput       Date:  2006-10-24       Impact factor: 2.602

3.  Validity and power in hemodynamic response modeling: a comparison study and a new approach.

Authors:  Martin A Lindquist; Tor D Wager
Journal:  Hum Brain Mapp       Date:  2007-08       Impact factor: 5.038

4.  Effect of voluntary repetitive long-lasting muscle contraction activity on the BOLD signal as assessed by optimal hemodynamic response function.

Authors:  Silvia Francesca Storti; Emanuela Formaggio; Deborah Moretto; Alessandra Bertoldo; Francesca Benedetta Pizzini; Alberto Beltramello; Antonio Fiaschi; Gianna Maria Toffolo; Paolo Manganotti
Journal:  MAGMA       Date:  2013-09-03       Impact factor: 2.310

5.  Optimal design for nonlinear estimation of the hemodynamic response function.

Authors:  Bärbel Maus; Gerard J P van Breukelen; Rainer Goebel; Martijn P F Berger
Journal:  Hum Brain Mapp       Date:  2011-05-12       Impact factor: 5.038

6.  Fast joint detection-estimation of evoked brain activity in event-related FMRI using a variational approach.

Authors:  Lotfi Chaari; Thomas Vincent; Florence Forbes; Michel Dojat; Philippe Ciuciu
Journal:  IEEE Trans Med Imaging       Date:  2012-10-19       Impact factor: 10.048

7.  A deconvolution algorithm for multi-echo functional MRI: Multi-echo Sparse Paradigm Free Mapping.

Authors:  César Caballero-Gaudes; Stefano Moia; Puja Panwar; Peter A Bandettini; Javier Gonzalez-Castillo
Journal:  Neuroimage       Date:  2019-08-13       Impact factor: 6.556

8.  Evaluating the impact of spatio-temporal smoothness constraints on the BOLD hemodynamic response function estimation: an analysis based on Tikhonov regularization.

Authors:  R Casanova; L Yang; W D Hairston; P J Laurienti; J A Maldjian
Journal:  Physiol Meas       Date:  2009-05-05       Impact factor: 2.833

9.  The impact of temporal regularization on estimates of the BOLD hemodynamic response function: a comparative analysis.

Authors:  Ramon Casanova; Srikanth Ryali; John Serences; Lucie Yang; Robert Kraft; Paul J Laurienti; Joseph A Maldjian
Journal:  Neuroimage       Date:  2008-01-26       Impact factor: 6.556

10.  Data-driven haemodynamic response function extraction using Fourier-wavelet regularised deconvolution.

Authors:  Alle Meije Wink; Hans Hoogduin; Jos B T M Roerdink
Journal:  BMC Med Imaging       Date:  2008-04-10       Impact factor: 1.930

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.