Literature DB >> 14551445

Application of a neural network in high-throughput protein crystallography.

A Berntson1, V Stojanoff, H Takai.   

Abstract

High-throughput protein crystallography requires the automation of multiple steps used in the protein structure determination. One crucial step is to find and monitor the crystal quality on the basis of its diffraction pattern. It is often time-consuming to scan protein crystals when selecting a good candidate for exposure. The use of neural networks for this purpose is explored. A dynamic neural network algorithm to achieve a fast convergence and high-speed image recognition has been developed. On the test set a 96% success rate in identifying properly the quality of the crystal has been achieved.

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Year:  2003        PMID: 14551445     DOI: 10.1107/s0909049503020855

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  2 in total

1.  Automated matching of two-time X-ray photon correlation maps from phase-separating proteins with Cahn-Hilliard-type simulations using auto-encoder networks.

Authors:  Sonja Timmermann; Vladimir Starostin; Anita Girelli; Anastasia Ragulskaya; Hendrik Rahmann; Mario Reiser; Nafisa Begam; Lisa Randolph; Michael Sprung; Fabian Westermeier; Fajun Zhang; Frank Schreiber; Christian Gutt
Journal:  J Appl Crystallogr       Date:  2022-06-15       Impact factor: 4.868

2.  A convolutional neural network-based screening tool for X-ray serial crystallography.

Authors:  Tsung Wei Ke; Aaron S Brewster; Stella X Yu; Daniela Ushizima; Chao Yang; Nicholas K Sauter
Journal:  J Synchrotron Radiat       Date:  2018-04-24       Impact factor: 2.616

  2 in total

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