Literature DB >> 1454523

Differential splicing creates a diversity of transcripts from a neurospecific developmentally regulated gene encoding a protein with new zinc-finger motifs.

V L Buchman1, N N Ninkina, Y D Bogdanov, A L Bortvin, H N Akopian, S L Kiselev, K V Anokhin, G P Georgiev.   

Abstract

We have cloned a novel neurospecific gene, named neuro-d4, by differential screening a rat cerebral cortex cDNA library. Northern blot hybridization showed that neuro-d4 expression is restricted to neuronal tissues both in newborn and adult animals. The level of neuro-d4 mRNA in the rat central nervous system is high during the later stages of embryonic development and gradually decreases during the postnatal period. In situ hybridization suggests that the gene transcripts are localized in neuronal cell bodies. Nucleotide sequences of overlapped cDNA clones and all 12 exons in genomic clone were determined. The deduced protein has consensus sequences for a nuclear localization signal, a Krüppel-type zinc-finger and a new type of cysteine/histidine-rich motif resembling zinc-fingers. Several differential splicing variants were found, each of which influences the structure of the encoded protein.

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Year:  1992        PMID: 1454523      PMCID: PMC334389          DOI: 10.1093/nar/20.21.5579

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  41 in total

1.  Sequence requirements for synthetic peptide-mediated translocation to the nucleus.

Authors:  D Chelsky; R Ralph; G Jonak
Journal:  Mol Cell Biol       Date:  1989-06       Impact factor: 4.272

2.  Characterization of Moloney murine leukemia virus mutants with single-amino-acid substitutions in the Cys-His box of the nucleocapsid protein.

Authors:  C Méric; S P Goff
Journal:  J Virol       Date:  1989-04       Impact factor: 5.103

3.  Dideoxy sequencing method using denatured plasmid templates.

Authors:  M Hattori; Y Sakaki
Journal:  Anal Biochem       Date:  1986-02-01       Impact factor: 3.365

4.  Nucleotide sequence of cloned cDNA specific for rat ribosomal protein L27.

Authors:  T Tanaka; Y Kuwano; K Ishikawa; K Ogata
Journal:  Eur J Biochem       Date:  1988-04-05

5.  Analysis of Krüppel protein distribution during early Drosophila development reveals posttranscriptional regulation.

Authors:  U Gaul; E Seifert; R Schuh; H Jäckle
Journal:  Cell       Date:  1987-08-14       Impact factor: 41.582

6.  Identification of a zinc finger protein that binds to the sterol regulatory element.

Authors:  T B Rajavashisth; A K Taylor; A Andalibi; K L Svenson; A J Lusis
Journal:  Science       Date:  1989-08-11       Impact factor: 47.728

7.  Molecular cloning, sequencing, and mapping of EGR2, a human early growth response gene encoding a protein with "zinc-binding finger" structure.

Authors:  L J Joseph; M M Le Beau; G A Jamieson; S Acharya; T B Shows; J D Rowley; V P Sukhatme
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

8.  sry h-1, a new Drosophila melanogaster multifingered protein gene showing maternal and zygotic expression.

Authors:  A Vincent; J Kejzlarovà-Lepesant; L Segalat; C Yanicostas; J A Lepesant
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

9.  Nucleotide sequence of a complete mouse intracisternal A-particle genome: relationship to known aspects of particle assembly and function.

Authors:  J A Mietz; Z Grossman; K K Lueders; E L Kuff
Journal:  J Virol       Date:  1987-10       Impact factor: 6.549

10.  The mechanism of chromosomal translocation t(11;14) involving the T-cell receptor C delta locus on human chromosome 14q11 and a transcribed region of chromosome 11p15.

Authors:  T Boehm; R Baer; I Lavenir; A Forster; J J Waters; E Nacheva; T H Rabbitts
Journal:  EMBO J       Date:  1988-02       Impact factor: 11.598

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  6 in total

1.  Negative regulation of PI 3-kinase by Ruk, a novel adaptor protein.

Authors:  I Gout; G Middleton; J Adu; N N Ninkina; L B Drobot; V Filonenko; G Matsuka; A M Davies; M Waterfield; V L Buchman
Journal:  EMBO J       Date:  2000-08-01       Impact factor: 11.598

2.  Double plant homeodomain (PHD) finger proteins DPF3a and -3b are required as transcriptional co-activators in SWI/SNF complex-dependent activation of NF-κB RelA/p50 heterodimer.

Authors:  Aya Ishizaka; Taketoshi Mizutani; Kazuyoshi Kobayashi; Toshio Tando; Kouhei Sakurai; Toshinobu Fujiwara; Hideo Iba
Journal:  J Biol Chem       Date:  2012-02-13       Impact factor: 5.157

3.  Double PHD fingers protein DPF2 recognizes acetylated histones and suppresses the function of estrogen-related receptor alpha through histone deacetylase 1.

Authors:  Reiko Matsuyama; Ichiro Takada; Atsushi Yokoyama; Sally Fujiyma-Nakamura; Naoya Tsuji; Hirochika Kitagawa; Ryoji Fujiki; Misun Kim; Madoka Kouzu-Fujita; Tetsu Yano; Shigeaki Kato
Journal:  J Biol Chem       Date:  2010-04-16       Impact factor: 5.157

4.  Persyn, a member of the synuclein family, has a distinct pattern of expression in the developing nervous system.

Authors:  V L Buchman; H J Hunter; L G Pinõn; J Thompson; E M Privalova; N N Ninkina; A M Davies
Journal:  J Neurosci       Date:  1998-11-15       Impact factor: 6.167

5.  The leukemia-associated-protein (LAP) domain, a cysteine-rich motif, is present in a wide range of proteins, including MLL, AF10, and MLLT6 proteins.

Authors:  V Saha; T Chaplin; A Gregorini; P Ayton; B D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

6.  Generation of mutant mice with targeted disruption of two members of the d4 gene family: neuro-d4 and cer-d4.

Authors:  I B Mertsalov; N N Ninkina; J S Wanless; V L Buchman; L I Korochkin; D A Kulikova
Journal:  Dokl Biochem Biophys       Date:  2008 Mar-Apr       Impact factor: 0.834

  6 in total

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