Literature DB >> 1454519

DNA conformational change induced by the bacteriophage phi 29 connector.

J M Valpuesta1, M Serrano, L E Donate, L Herranz, J L Carrascosa.   

Abstract

Translocation of viral DNA inwards and outwards of the capsid of double-stranded DNA bacteriophages occurs through the connector, a key viral structure that is known to interact with DNA. It is shown here that phage phi 29 connector binds both linear and circular double-stranded DNA. However, DNA-mediated protection of phi 29 connectors against Staphylococcus aureus endoprotease V8 digestion suggests that binding to linear DNA is more stable than to circular DNA. Endoprotease V8-protection assays also suggest that the length of the linear DNA required to produce a stable phi 29 connector-DNA interaction is, at least, twice longer than the phi 29 connector channel. This result is confirmed by experiments of phi 29 connector-protection of DNA against DNase I digestion. Furthermore, DNA circularization assays indicate that phi 29 connectors restrain negative supercoiling when bound to linear DNA. This DNA conformational change is not observed upon binding to circular DNA and it could reflect the existence of some left-handed DNA coiling or DNA untwisting inside of the phi 29 connector channel.

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Year:  1992        PMID: 1454519      PMCID: PMC334385          DOI: 10.1093/nar/20.21.5549

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

Review 1.  Closed circular DNA as a probe for protein-induced structural changes.

Authors:  J H White; R M Gallo; W R Bauer
Journal:  Trends Biochem Sci       Date:  1992-01       Impact factor: 13.807

2.  Characterization of a versatile in vitro DNA-packaging system based on hybrid lambda/phi 29 proheads.

Authors:  L E Donate; J L Carrascosa
Journal:  Virology       Date:  1991-06       Impact factor: 3.616

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Authors:  C Bazinet; J King
Journal:  Annu Rev Microbiol       Date:  1985       Impact factor: 15.500

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Authors:  R W Hendrix
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

Review 5.  DNA packaging by the double-stranded DNA bacteriophages.

Authors:  W C Earnshaw; S R Casjens
Journal:  Cell       Date:  1980-09       Impact factor: 41.582

6.  Bacteriophage T3 connector: three-dimensional structure and comparison with other viral head-tail connecting regions.

Authors:  L E Donate; L Herranz; J P Secilla; J M Carazo; H Fujisawa; J L Carrascosa
Journal:  J Mol Biol       Date:  1988-05-05       Impact factor: 5.469

7.  Bacteriophage T3 gene 8 product oligomer structure.

Authors:  J M Carazo; H Fujisawa; S Nakasu; J L Carrascosa
Journal:  J Ultrastruct Mol Struct Res       Date:  1986-02

8.  Bacteriophage lambda preconnectors. Purification and structure.

Authors:  J Kochan; J L Carrascosa; H Murialdo
Journal:  J Mol Biol       Date:  1984-04-15       Impact factor: 5.469

9.  A topological model for transcription based on unwinding angle analysis of E. coli RNA polymerase binary, initiation and ternary complexes.

Authors:  H B Gamper; J E Hearst
Journal:  Cell       Date:  1982-05       Impact factor: 41.582

10.  Assembly of Bacillus subtilis phage phi29. 1. Mutants in the cistrons coding for the structural proteins.

Authors:  A Camacho; F Jiménez; J De La Torre; J L Carrascosa; R P Mellado; C Vásquez; E Viñuela; M Salas
Journal:  Eur J Biochem       Date:  1977-02-15
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  3 in total

1.  The bacteriophage phi29 head-tail connector imaged at high resolution with the atomic force microscope in buffer solution.

Authors:  D J Müller; A Engel; J L Carrascosa; M Vélez
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

2.  Alterations of the portal protein, gpB, of bacteriophage lambda suppress mutations in cosQ, the site required for termination of DNA packaging.

Authors:  Douglas J Wieczorek; Lisa Didion; Michael Feiss
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

3.  RNA-mediated specificity of DNA packaging into hybrid lambda/phi 29 proheads.

Authors:  J M Valpuesta; L E Donate; C Mier; L Herranz; J L Carrascosa
Journal:  EMBO J       Date:  1993-11       Impact factor: 11.598

  3 in total

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