Literature DB >> 14527225

The full topology of the Laplacian of the electron density: scrutinising a physical basis for the VSEPR model.

Nathaniel O J Malcolm1, Paul L A Popelier.   

Abstract

Within the framework of quantum chemical topology (QCT) the function L(r), which equals the negative of the Laplacian of the electron density, has been proposed before as a physical basis for the valence shell electron pair repulsion (VSEPR) model. The availability of a new algorithm to integrate property densities over the basins of L(r) enabled a re-evaluation of this physical basis. We optimised a set of nine molecules at B3LYP/6-311+G(2d,p) level and partitioned the corresponding L(r) function for each molecule into basins. For the first time we visualise these basins in L(r), by directly showing their boundaries. We identify the basins in L(r) with the domains of the VSEPR model. Observations drawn from the populations and volumes of L-basins are contrasted with the three subsidiary VSEPR postulates. We find unexpectedly small populations, nearer to one than to two, for non-hydrogen cores and bonding domains, and populations much larger than two for non-bonding domains. We conclude that non-bonding or lone pairs have larger domains than bonding pairs in the same valence shell, in accordance with VSEPR. We also confirm that double and triple bond domains are larger than single-bond domains. However we cannot substantiate the effect of the electronegativity of central atom or ligand on the volume of bonding domains. In summary, the full topology of L(r) supports two out of three subsidiary VSEPR postulates.

Entities:  

Year:  2003        PMID: 14527225     DOI: 10.1039/b211650m

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  6 in total

1.  TIP5P-Consistent Treatment of Electrostatics for Biomolecular Simulations.

Authors:  Sarah M Tschampel; Michael R Kennerty; Robert J Woods
Journal:  J Chem Theory Comput       Date:  2007-09-01       Impact factor: 6.006

2.  An ab initio study on coinage atom-inserted cyanide/isocyanide: XMCN/XMNC (M = coinage atoms; X = halogen).

Authors:  Zhengguo Huang; Xiaohong Wang; Jingbo Zhang; Yuqing Li; Yuying Li
Journal:  RSC Adv       Date:  2018-04-18       Impact factor: 4.036

3.  Electronic structures of bisnoradamantenyl and bisnoradamantanyl dications and related species.

Authors:  Caio L Firme; Tamires F da Costa; Eduardo T da Penha; Pierre M Esteves
Journal:  J Mol Model       Date:  2013-02-28       Impact factor: 1.810

4.  Geometry Optimization with Machine Trained Topological Atoms.

Authors:  François Zielinski; Peter I Maxwell; Timothy L Fletcher; Stuart J Davie; Nicodemo Di Pasquale; Salvatore Cardamone; Matthew J L Mills; Paul L A Popelier
Journal:  Sci Rep       Date:  2017-10-09       Impact factor: 4.379

5.  Unfavorable regions in the ramachandran plot: Is it really steric hindrance? The interacting quantum atoms perspective.

Authors:  Peter I Maxwell; Paul L A Popelier
Journal:  J Comput Chem       Date:  2017-08-25       Impact factor: 3.376

6.  The nature of multiple boron-nitrogen bonds studied using electron localization function (ELF), electron density (AIM), and natural bond orbital (NBO) methods.

Authors:  Grzegorz Mierzwa; Agnieszka J Gordon; Slawomir Berski
Journal:  J Mol Model       Date:  2020-05-13       Impact factor: 1.810

  6 in total

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