Literature DB >> 14527149

Functional and structural characterization of ovine ornithine transcarbamoylase.

Ambra De Gregorio1, Roberto Battistutta, Nicoletta Arena, Manuela Panzalorto, Pietro Francescato, Giovanna Valentini, Giuseppe Bruno, Giuseppe Zanotti.   

Abstract

Ornithine transcarbamoylase from ovine liver has been purified to homogeneity. Like all anabolic OTCs, the ovine enzyme is a trimer, constituted by identical subunits of 34 kDa. Sequence analysis of the 54 N-terminal residues of ovine OTC shows a high degree of homology with the human enzyme. The optimum pH and the Michaelis constants for the catalytic reaction were determined. The ovine enzyme is the most thermostable one among mammals OTCs, its critical temperature being 6 degrees C higher than those measured for the other enzymes. The enzyme has been crystallised and the structure determined at 3.5 A resolution. Crystals belong to the cubic P4(3)32 space group, with a = b = c = 184.7 A and a solvent content of about 80%. There is no evidence of any ligand in the active site cavity, indicating that the crystals contain an unliganded or T state of the enzyme. The unliganded OTCase enzyme adopts a trimeric structure which, in the crystal, presents a three-fold axis coincident with the crystallographic one. The conformation of each monomer in the trimer is quite similar to that of the liganded human protein, with the exception of a few loops, directly interacting with the substrate(s), which are able to induce a rearrangement of the quaternary organisation of the trimer, that accounts for the cooperative behaviour of the enzyme following the binding of the substrates.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14527149     DOI: 10.1039/b304901a

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  4 in total

1.  Expression, purification, crystallization and preliminary X-ray analysis of two arginine-biosynthetic enzymes from Mycobacterium tuberculosis.

Authors:  Fatemeh Moradian; Craig Garen; Leonid Cherney; Maia Cherney; Michael N G James
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-09-30

2.  Crystal structure and biochemical properties of putrescine carbamoyltransferase from Enterococcus faecalis: Assembly, active site, and allosteric regulation.

Authors:  Dashuang Shi; Xiaolin Yu; Gengxiang Zhao; Jeremy Ho; Shennon Lu; Norma M Allewell; Mendel Tuchman
Journal:  Proteins       Date:  2012-02-13

3.  Structure of anabolic ornithine carbamoyltransferase from Campylobacter jejuni at 2.7 Å resolution.

Authors:  I G Shabalin; P J Porebski; D R Cooper; M Grabowski; O Onopriyenko; S Grimshaw; A Savchenko; M Chruszcz; W Minor
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-08-29

Review 4.  From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases.

Authors:  Dashuang Shi; Norma M Allewell; Mendel Tuchman
Journal:  Int J Mol Sci       Date:  2015-08-12       Impact factor: 5.923

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.