Literature DB >> 14518736

Neural network-based assessment of prognostic markers and outcome prediction in bilharziasis-associated bladder cancer.

Wei Ji1, Raouf N G Naguib, Mohamed A Ghoneim.   

Abstract

In this paper the potential value of two prognostic factors, namely, bilharziasis status and tumor histological type, is investigated in relation to their abilities to predict disease progression and outcome of patients with bladder cancer, using radial basis function (RBF) neural networks. The bladder cancer data set is described by eight clinical and pathological markers. Two outcomes are of interest: either a patient is alive and free of disease or the patient is dead within five years of diagnosis. Three hundred and twenty-one (321) patients are involved in this retrospective study, 83.5% of whom had been confirmed with bilharziasis history. Selected marker subsets are examined to improve the outcome predictive accuracy and to evaluate the effects of the assessed prognostic factors on such outcome. The highest predictive accuracy for patients with bladder adenocarcinoma, as obtained from the RBF network, is found to be 85% with one subset of markers. The predictive analysis shows that bilharziasis history and patients' histology type are both important prognostic factors in prediction and, for each histology type, different marker combinations with significant characteristics have been observed.

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Year:  2003        PMID: 14518736     DOI: 10.1109/titb.2003.813796

Source DB:  PubMed          Journal:  IEEE Trans Inf Technol Biomed        ISSN: 1089-7771


  3 in total

1.  High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID).

Authors:  Barry R Zeeberg; Haiying Qin; Sudarshan Narasimhan; Margot Sunshine; Hong Cao; David W Kane; Mark Reimers; Robert M Stephens; David Bryant; Stanley K Burt; Eldad Elnekave; Danielle M Hari; Thomas A Wynn; Charlotte Cunningham-Rundles; Donn M Stewart; David Nelson; John N Weinstein
Journal:  BMC Bioinformatics       Date:  2005-07-05       Impact factor: 3.169

2.  Parameter estimation for stiff equations of biosystems using radial basis function networks.

Authors:  Yoshiya Matsubara; Shinichi Kikuchi; Masahiro Sugimoto; Masaru Tomita
Journal:  BMC Bioinformatics       Date:  2006-04-27       Impact factor: 3.169

3.  Applications of machine learning in cancer prediction and prognosis.

Authors:  Joseph A Cruz; David S Wishart
Journal:  Cancer Inform       Date:  2007-02-11
  3 in total

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