Literature DB >> 14517900

Peptide-bond modification for metal coordination: peptides containing two hydroxamate groups.

Yunpeng Ye1, Min Liu, Jeff L-K Kao, Garland R Marshall.   

Abstract

Peptide-bond modification via N-hydroxylation has been explored as a strategy for metal coordination to induce conformational rigidity and orient side chains for specific molecular recognition. N-Hydroxyamides were prepared by reacting N-benzyloxyamino acid esters or amides with Fmoc-AA-Cl/AgCN (Fmoc: 9-fluorenylmethoxycarbonyl; AA: amino acid) in toluene or Fmoc-AA/HATU/DIEA in DMF (HATU: O-(7-azabenzotriazol-lyl)-1,1,3,3-tetramethyluronium hexafluorophosphate; DIEA: N,N-diisopropylethylamine; DMF: N,N-dimethylformamide), followed by deblocking of benzyl protecting groups. Novel linear and cyclic N,N'-dihydroxypeptides were efficiently assembled using Fmoc chemistry in solution and/or on a solid support. As screened by electrospray ionization-mass spectroscopy (ESI-MS), high iron-binding selectivity and affinity were attainable. Compounds having a spacer of two alpha-amino acids between the amino acids bearing the two hydroxamates, i.e., a spacer of 8 atoms, generated 1:1 iron complex species in the gas phase. Moreover, high performance liquid chromatography (HPLC), uv/vis, and (1)H-NMR analyses provided direct evidence for complex formations in solution. Significantly, the representative compound cyclo(Leu-Psi[CON(OH)]-Phe-Ala-Pro)(2) (P8) may serve as a robust metal-binding scaffold in construction of a metal-binding library for versatile metal-mediated molecular recognition. Copyright 2003 Wiley Periodicals, Inc.

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Year:  2003        PMID: 14517900     DOI: 10.1002/bip.10471

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  4 in total

1.  Integrating the intrinsic conformational preferences of noncoded α-amino acids modified at the peptide bond into the noncoded amino acids database.

Authors:  Guillem Revilla-López; Francisco Rodríguez-Ropero; David Curcó; Juan Torras; M Isabel Calaza; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal:  Proteins       Date:  2011-04-12

2.  Structure-Property Relationship Study of N-(Hydroxy)Peptides for the Design of Self-Assembled Parallel β-Sheets.

Authors:  Alexis D Richaud; Stéphane P Roche
Journal:  J Org Chem       Date:  2020-09-17       Impact factor: 4.354

3.  Novel near-infrared fluorescent integrin-targeted DFO analogue.

Authors:  Yunpeng Ye; Sharon Bloch; Baogang Xu; Samuel Achilefu
Journal:  Bioconjug Chem       Date:  2007-11-27       Impact factor: 4.774

4.  Design, synthesis and activity evaluation of mannose-based DC-SIGN antagonists.

Authors:  Nataša Obermajer; Sara Sattin; Cinzia Colombo; Michela Bruno; Urban Svajger; Marko Anderluh; Anna Bernardi
Journal:  Mol Divers       Date:  2010-11-14       Impact factor: 2.943

  4 in total

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