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Literature DB >> 14512615

Biological networks: the tinkerer as an engineer.

Abstract

This viewpoint comments on recent advances in understanding the design principles of biological networks. It highlights the surprising discovery of "good-engineering" principles in biochemical circuitry that evolved by random tinkering.

Mesh：

Substances：
Proteins
DNA

Year: 2003 PMID： 14512615 DOI： 10.1126/science.1089072

Source DB: PubMed Journal: Science ISSN： 0036-8075 Impact factor: 47.728

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Cited

139 in total

1. Design of a directed molecular network.

Authors: Gonen Ashkenasy; Reshma Jagasia; Maneesh Yadav; M Reza Ghadiri
Journal: Proc Natl Acad Sci U S A Date: 2004-07-15 Impact factor: 11.205

2. Modularity from fluctuations in random graphs and complex networks.

Authors: Roger Guimerà; Marta Sales-Pardo; Luís A Nunes Amaral
Journal: Phys Rev E Stat Nonlin Soft Matter Phys Date: 2004-08-19

3. Evolution of a modular software network.

Authors: Miguel A Fortuna; Juan A Bonachela; Simon A Levin
Journal: Proc Natl Acad Sci U S A Date: 2011-11-21 Impact factor: 11.205

4. Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks.

Authors: Koon-Kiu Yan; Gang Fang; Nitin Bhardwaj; Roger P Alexander; Mark Gerstein
Journal: Proc Natl Acad Sci U S A Date: 2010-05-03 Impact factor: 11.205

Biological networks: the tinkerer as an engineer.

1. Design of a directed molecular network.

2. Modularity from fluctuations in random graphs and complex networks.

3. Evolution of a modular software network.

4. Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks.

5. Natural taurine promotes apoptosis of human hepatic stellate cells in proteomics analysis.

Review 6. "Neural networks" in bacteria: making connections.

7. An initial blueprint for myogenic differentiation.

8. Topological signatures of species interactions in metabolic networks.

Review 9. Integrative approaches for finding modular structure in biological networks.

10. Chemical master equation closure for computer-aided synthetic biology.