Literature DB >> 14504232

Transposon mutagenesis of the mouse germline.

Corey M Carlson1, Adam J Dupuy, Sabine Fritz, Kevin J Roberg-Perez, Colin F Fletcher, David A Largaespada.   

Abstract

Sleeping Beauty is a synthetic "cut-and-paste" transposon of the Tc1/mariner class. The Sleeping Beauty transposase (SB) was constructed on the basis of a consensus sequence obtained from an alignment of 12 remnant elements cloned from the genomes of eight different fish species. Transposition of Sleeping Beauty elements has been observed in cultured cells, hepatocytes of adult mice, one-cell mouse embryos, and the germline of mice. SB has potential as a random germline insertional mutagen useful for in vivo gene trapping in mice. Previous work in our lab has demonstrated transposition in the male germline of mice and transmission of novel inserted transposons in offspring. To determine sequence preferences and mutagenicity of SB-mediated transposition, we cloned and analyzed 44 gene-trap transposon insertion sites from a panel of 30 mice. The distribution and sequence content flanking these cloned insertion sites was compared to 44 mock insertion sites randomly selected from the genome. We find that germline SB transposon insertion sites are AT-rich and the sequence ANNTANNT is favored compared to other TA dinucleotides. Local transposition occurs with insertions closely linked to the donor site roughly one-third of the time. We find that approximately 27% of the transposon insertions are in transcription units. Finally, we characterize an embryonic lethal mutation caused by endogenous splicing disruption in mice carrying a particular intron-inserted gene-trap transposon.

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Year:  2003        PMID: 14504232      PMCID: PMC1462753     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  33 in total

1.  Molecular and functional analysis of the mariner mutator element Mos1 in Drosophila.

Authors:  M Medhora; K Maruyama; D L Hartl
Journal:  Genetics       Date:  1991-06       Impact factor: 4.562

2.  A gene trap approach in mouse embryonic stem cells: the lacZ reported is activated by splicing, reflects endogenous gene expression, and is mutagenic in mice.

Authors:  W C Skarnes; B A Auerbach; A L Joyner
Journal:  Genes Dev       Date:  1992-06       Impact factor: 11.361

3.  Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells.

Authors:  Z Ivics; P B Hackett; R H Plasterk; Z Izsvák
Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

4.  Modes of DAPI banding and simultaneous in situ hybridization.

Authors:  H H Heng; L C Tsui
Journal:  Chromosoma       Date:  1993-05       Impact factor: 4.316

5.  Chromosomal transposition of a Tc1/mariner-like element in mouse embryonic stem cells.

Authors:  G Luo; Z Ivics; Z Izsvák; A Bradley
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

6.  Target site choice of the related transposable elements Tc1 and Tc3 of Caenorhabditis elegans.

Authors:  H G van Luenen; R H Plasterk
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

7.  MTID: a database of Sleeping Beauty transposon insertions in mice.

Authors:  Kevin Roberg-Perez; Corey M Carlson; David A Largaespada
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

Review 8.  Mitochondrial carrier proteins.

Authors:  F Palmieri
Journal:  FEBS Lett       Date:  1994-06-06       Impact factor: 4.124

9.  Mobilization of quiet, endogenous Tc3 transposons of Caenorhabditis elegans by forced expression of Tc3 transposase.

Authors:  H G van Luenen; S D Colloms; R H Plasterk
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

10.  Preferential transposition of Drosophila P elements to nearby chromosomal sites.

Authors:  J Tower; G H Karpen; N Craig; A C Spradling
Journal:  Genetics       Date:  1993-02       Impact factor: 4.562

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  67 in total

1.  Enhancement of Sleeping Beauty transposition by CpG methylation: possible role of heterochromatin formation.

Authors:  Kosuke Yusa; Junji Takeda; Kyoji Horie
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

2.  Sleeping Beauty transposon mutagenesis in rat spermatogonial stem cells.

Authors:  Zoltán Ivics; Zsuzsanna Izsvák; Gerardo Medrano; Karen M Chapman; F Kent Hamra
Journal:  Nat Protoc       Date:  2011-09-08       Impact factor: 13.491

3.  Sleeping Beauty transposon mutagenesis of the rat genome in spermatogonial stem cells.

Authors:  Zoltán Ivics; Zsuzsanna Izsvák; Karen M Chapman; F Kent Hamra
Journal:  Methods       Date:  2010-12-28       Impact factor: 3.608

Review 4.  Review: In vivo models for defining molecular subtypes of the primitive neuroectodermal tumor genome: current challenges and solutions.

Authors:  Jon D Larson; David A Largaespada
Journal:  In Vivo       Date:  2012 Jul-Aug       Impact factor: 2.155

5.  Germline modification of domestic animals.

Authors:  L Tang; R González; I Dobrinski
Journal:  Anim Reprod       Date:  2015 Jan-Mar       Impact factor: 1.807

6.  High-resolution genome-wide mapping of transposon integration in mammals.

Authors:  Stephen R Yant; Xiaolin Wu; Yong Huang; Brian Garrison; Shawn M Burgess; Mark A Kay
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

Review 7.  Fishing for answers with transposons.

Authors:  Shannon A Wadman; Karl J Clark; Perry B Hackett
Journal:  Mar Biotechnol (NY)       Date:  2005-05-05       Impact factor: 3.619

8.  Sleeping beauty transposase has an affinity for heterochromatin conformation.

Authors:  Ryuji Ikeda; Chikara Kokubu; Kosuke Yusa; Vincent W Keng; Kyoji Horie; Junji Takeda
Journal:  Mol Cell Biol       Date:  2006-12-18       Impact factor: 4.272

9.  Chromosomal transposition of PiggyBac in mouse embryonic stem cells.

Authors:  Wei Wang; Chengyi Lin; Dong Lu; Zeming Ning; Tony Cox; David Melvin; Xiaozhong Wang; Allan Bradley; Pentao Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

10.  Transposon-mediated mutagenesis of somatic cells in the mouse for cancer gene identification.

Authors:  David A Largaespada
Journal:  Methods       Date:  2009-07-14       Impact factor: 3.608

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