Literature DB >> 1435237

Group I introns within the nuclear-encoded small-subunit rRNA gene of three green algae.

L W Wilcox1, L A Lewis, P A Fuerst, G L Floyd.   

Abstract

Four group I introns from the nuclear-encoded (18S) rRNA genes of three chlorophycean green algae are described; two are in Dunaliella parva, and one each is in D. salina and Characium saccatum. The introns within the gene in the latter two organisms are located at the sites equivalent to the 5' and 3' introns of D. parva, respectively. All four introns lack open reading frames and are relatively small, 381-447 bp. Both primary- and secondary-structural features place these introns within subgroup IC1 described by Michel and Westhof. Phylogenetic relationships of the three intron-containing taxa and their relatives, as inferred from comparisons of 18S rDNA sequences, suggest that inheritance of the introns along with the gene can account for their present distribution. The discovery of these four introns, in addition to two others known to exist in other chlorophycean green algae, suggests that group I introns within the 18S rRNA gene may be relatively common in the green algae.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1435237     DOI: 10.1093/oxfordjournals.molbev.a040781

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  15 in total

1.  A small insertion in the SSU rDNA of the lichen fungus Arthonia lapidicola is a degenerate group-I intron.

Authors:  M Grube; A Gargas; P T DePriest
Journal:  Curr Genet       Date:  1996-05       Impact factor: 3.886

2.  Group I introns are inherited through common ancestry in the nuclear-encoded rRNA of Zygnematales (Charophyceae).

Authors:  D Bhattacharya; B Surek; M Rüsing; S Damberger; M Melkonian
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-11       Impact factor: 11.205

3.  Loss of the ORF in the SSUrDNA group I intron of one Naegleria lineage.

Authors:  J F De Jonckheere; S Brown
Journal:  Nucleic Acids Res       Date:  1994-09-25       Impact factor: 16.971

4.  Discovery of group I introns in the nuclear small subunit ribosomal RNA genes of Acanthamoeba.

Authors:  R J Gast; P A Fuerst; T J Byers
Journal:  Nucleic Acids Res       Date:  1994-02-25       Impact factor: 16.971

5.  Self-splicing group I introns in eukaryotic viruses.

Authors:  T Yamada; K Tamura; T Aimi; P Songsri
Journal:  Nucleic Acids Res       Date:  1994-07-11       Impact factor: 16.971

6.  Characterization of rbcL group IA introns from two colonial volvocalean species (Chlorophyceae).

Authors:  H Nozaki; N Ohta; T Yamada; H Takano
Journal:  Plant Mol Biol       Date:  1998-05       Impact factor: 4.076

7.  Introduction of a novel 18S rDNA gene arrangement along with distinct ITS region in the saline water microalga Dunaliella.

Authors:  Abolfazl Barzegari; Nahid Hosseinzadeh Gharajeh; Mohammad A Hejazi; Mohammad S Hejazi
Journal:  Saline Syst       Date:  2010-04-08

8.  DNA fingerprinting differentiation between beta-carotene hyperproducer strains of Dunaliella from around the world.

Authors:  Jorge Olmos; Leonel Ochoa; Jesus Paniagua-Michel; Rosalía Contreras
Journal:  Saline Systems       Date:  2009-06-30

9.  Group I introns interrupt the chloroplast psaB and psbC and the mitochondrial rrnL gene in Chlamydomonas.

Authors:  M Turmel; J P Mercier; M J Côté
Journal:  Nucleic Acids Res       Date:  1993-11-11       Impact factor: 16.971

10.  Multiple group I introns detected in the nuclear small subunit rDNA of the autosporic green alga Selenastrum capricornutum.

Authors:  Gregory C Booton; Gary L Floyd; Paul A Fuerst
Journal:  Curr Genet       Date:  2004-09-02       Impact factor: 3.886

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.