Literature DB >> 1429542

Catalytic sites of Escherichia coli F1-ATPase.

A E Senior1.   

Abstract

The catalytic site of Escherichia coli F1-ATPase is reviewed in terms of structure and function. Structural prediction, biochemical analyses, and mutagenesis experiments suggest that the catalytic site is formed primarily by residues 137-335 of beta-subunit. Subdomains of the site involved in phosphate-bond cleavage/synthesis and adenine-ring binding are discussed. Ambiguities inherent in steady-state catalytic measurements due to catalytic site cooperativity are discussed, and the advantages of pre-steady-state ("unisite") techniques are emphasized. The emergence of a single high-affinity catalytic site occurs as a result of F1-oligomer assembly. Measurements of unisite catalysis rate and equilibrium constants, and their modulation by varied pH, dimethylsulfoxide, and mutations, are described and conclusions regarding the nature of the high-affinity catalytic site and mechanism of catalysis are presented.

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Year:  1992        PMID: 1429542     DOI: 10.1007/bf00762365

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  34 in total

1.  The alpha 3 beta 3 complex, the catalytic core of F1-ATPase.

Authors:  K Miwa; M Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

2.  Mutations in alpha-subunit of Escherichia coli F1-ATPase obtained by hydroxylamine-mutagenesis of plasmids carrying the uncA gene.

Authors:  J Pagan; A E Senior
Journal:  Arch Biochem Biophys       Date:  1990-03       Impact factor: 4.013

3.  Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis.

Authors:  A R Fersht
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

Review 4.  Tinkering with enzymes: what are we learning?

Authors:  J R Knowles
Journal:  Science       Date:  1987-06-05       Impact factor: 47.728

5.  The defective proton-ATPase of uncD mutants of Escherichia coli. Two mutations which affect the catalytic mechanism.

Authors:  T M Duncan; A E Senior
Journal:  J Biol Chem       Date:  1985-04-25       Impact factor: 5.157

6.  Stoichiometry of the H+-ATPase of growing and resting, aerobic Escherichia coli.

Authors:  E R Kashket
Journal:  Biochemistry       Date:  1982-10-26       Impact factor: 3.162

7.  Catalytic sites of Escherichia coli F1-ATPase. Characterization of unisite catalysis at varied pH.

Authors:  M K al-Shawi; A E Senior
Journal:  Biochemistry       Date:  1992-01-28       Impact factor: 3.162

8.  Site-directed mutagenesis of stable adenosine triphosphate synthase.

Authors:  M Yohda; S Ohta; T Hisabori; Y Kagawa
Journal:  Biochim Biophys Acta       Date:  1988-03-30

9.  Structure of the nucleotide-binding domain in the beta-subunit of Escherichia coli F1-ATPase.

Authors:  T M Duncan; D Parsonage; A E Senior
Journal:  FEBS Lett       Date:  1986-11-10       Impact factor: 4.124

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  16 in total

Review 1.  Bioenergetics of the Archaea.

Authors:  G Schäfer; M Engelhard; V Müller
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

2.  The missing link between thermodynamics and structure in F1-ATPase.

Authors:  W Yang; Y Q Gao; Q Cui; J Ma; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

3.  The unbinding of ATP from F1-ATPase.

Authors:  Iris Antes; David Chandler; Hongyun Wang; George Oster
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

4.  Elastic energy storage in beta-sheets with application to F1-ATPase.

Authors:  Sean Sun; David Chandler; Aaron R Dinner; George Oster
Journal:  Eur Biophys J       Date:  2003-09-03       Impact factor: 1.733

5.  Why is the mechanical efficiency of F(1)-ATPase so high?

Authors:  G Oster; H Wang
Journal:  J Bioenerg Biomembr       Date:  2000-10       Impact factor: 2.945

6.  Asymmetry in the F1-ATPase and its implications for the rotational cycle.

Authors:  Sean X Sun; Hongyun Wang; George Oster
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

7.  A small post-translocation energy bias aids nucleotide selection in T7 RNA polymerase transcription.

Authors:  Jin Yu; George Oster
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

8.  Simple models for extracting mechanical work from the ATP hydrolysis cycle.

Authors:  Jonathan L Eide; Arup K Chakraborty; George F Oster
Journal:  Biophys J       Date:  2006-03-31       Impact factor: 4.033

9.  Rate of hydrolysis in ATP synthase is fine-tuned by α-subunit motif controlling active site conformation.

Authors:  Tamás Beke-Somfai; Per Lincoln; Bengt Nordén
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-23       Impact factor: 11.205

10.  A model for the cooperative free energy transduction and kinetics of ATP hydrolysis by F1-ATPase.

Authors:  Yi Qin Gao; Wei Yang; Rudolph A Marcus; Martin Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-18       Impact factor: 11.205

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