Literature DB >> 1420887

Formation of a square-planar Co(I) B12 intermediate. Implications for enzyme catalysis.

M D Wirt1, I Sagi, M R Chance.   

Abstract

X-ray edge and extended x-ray absorption fine structure (EXAFS) techniques provide powerful tools for analysis of local molecular structure of complexes in solution. We present EXAFS results for Co(I) B12 that demonstrate a four-coordinate (distorted) square-planar configuration. Comparison of EXAFS solutions for Co(I) and Co(II) B12 (collected previously; Sagi et al. 1990. J. Am. Chem. Soc. 112:8639-8644) suggest that modulation of the Co-N bond to the axial 5,6-dimethylbenzimidazole (DMB), in the absence of changes in Co-N (equatorial) bond distances, may be a key mechanism in promoting homolytic versus heterolytic cleavage. As Co-C bond homolysis occurs, the Co-N (DMB) bond becomes stronger. However, for heterolytic cleavage to occur, earlier electrochemical studies (D. Lexa and J. M. Saveant. 1976. J. Am. Chem. Soc. 98:2652-2658) and recent studies of methylcobalamin-dependent Clostridium thermoaceticum (Ragsdale et al. 1987. J. Biol. Chem. 262:14289-14297) suggest that removal of the DMB ligand (before Co-C bond cleavage) favors formation of the four-coordinate square-planar Co(I) species while inhibiting formation of the five-coordinate Co(II) B12 complex. This paper presents the first direct evidence that formation of the Co(I) B12 intermediate must involve breaking of the Co-N (DMB) bond.

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Year:  1992        PMID: 1420887      PMCID: PMC1262164          DOI: 10.1016/S0006-3495(92)81605-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  10 in total

1.  Electrochemistry of vitamin B12. I. Role of the base-on/base-off reaction in the oxidoreduction mechanism of the B12r-B12s system.

Authors:  D Lexa; J M Saveant
Journal:  J Am Chem Soc       Date:  1976-04-28       Impact factor: 15.419

2.  Mössbauer, EPR, and optical studies of the corrinoid/iron-sulfur protein involved in the synthesis of acetyl coenzyme A by Clostridium thermoaceticum.

Authors:  S W Ragsdale; P A Lindahl; E Münck
Journal:  J Biol Chem       Date:  1987-10-15       Impact factor: 5.157

3.  Mechanisms of coenzyme B12-dependent rearrangements.

Authors:  J Halpern
Journal:  Science       Date:  1985-02-22       Impact factor: 47.728

Review 4.  Cobalamin-dependent methionine synthase.

Authors:  R V Banerjee; R G Matthews
Journal:  FASEB J       Date:  1990-03       Impact factor: 5.191

5.  Cytochrome c peroxidase compound ES is identical with horseradish peroxide compound I in iron-ligand distances.

Authors:  M Chance; L Powers; T Poulos; B Chance
Journal:  Biochemistry       Date:  1986-03-25       Impact factor: 3.162

6.  Spectroelectrochemical studies of the corrinoid/iron-sulfur protein involved in acetyl coenzyme A synthesis by Clostridium thermoaceticum.

Authors:  S R Harder; W P Lu; B A Feinberg; S W Ragsdale
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

7.  Cobalamin-dependent methionine synthase from Escherichia coli B: electron paramagnetic resonance spectra of the inactive form and the active methylated form of the enzyme.

Authors:  V Frasca; R V Banerjee; W R Dunham; R H Sands; R G Matthews
Journal:  Biochemistry       Date:  1988-11-01       Impact factor: 3.162

8.  Movement of Fe with respect to the heme plane in the R-T transition of carp hemoglobin. An extended x-ray absorption fine structure study.

Authors:  M R Chance; L J Parkhurst; L S Powers; B Chance
Journal:  J Biol Chem       Date:  1986-05-05       Impact factor: 5.157

9.  X-ray absorption studies of myoglobin peroxide reveal functional differences between globins and heme enzymes.

Authors:  M Chance; L Powers; C Kumar; B Chance
Journal:  Biochemistry       Date:  1986-03-25       Impact factor: 3.162

10.  Structural features and the reaction mechanism of cytochrome oxidase: iron and copper X-ray absorption fine structure.

Authors:  L Powers; B Chance; Y Ching; P Angiolillo
Journal:  Biophys J       Date:  1981-06       Impact factor: 4.033

  10 in total
  4 in total

1.  Structural insights into the mechanism of four-coordinate Cob(II)alamin formation in the active site of the Salmonella enterica ATP:Co(I)rrinoid adenosyltransferase enzyme: critical role of residues Phe91 and Trp93.

Authors:  Theodore C Moore; Sean A Newmister; Ivan Rayment; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2012-11-21       Impact factor: 3.162

2.  Effect of homocysteine, folates, and cobalamin on endothelial cell- and copper-induced LDL oxidation.

Authors:  Ana María Ronco; Argelia Garrido; Miguel N Llanos; Carlos Guerrero-Bosagna; Daniela Tamayo; Sandra Hirsch
Journal:  Lipids       Date:  2005-03       Impact factor: 1.880

3.  Co+-H interaction inspired alternate coordination geometries of biologically important cob(I)alamin: possible structural and mechanistic consequences for methyltransferases.

Authors:  Manoj Kumar; Hajime Hirao; Pawel M Kozlowski
Journal:  J Biol Inorg Chem       Date:  2012-08-08       Impact factor: 3.358

4.  Spectroscopic and computational characterization of the base-off forms of cob(II)alamin.

Authors:  Matthew D Liptak; Angela S Fleischhacker; Rowena G Matthews; Joshua Telser; Thomas C Brunold
Journal:  J Phys Chem B       Date:  2009-04-16       Impact factor: 2.991

  4 in total

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