Literature DB >> 1408834

Differential ASF/SF2 activity in extracts from normal WI38 and transformed WI38VA13 cells.

B Chabot1, D Frappier, H La Branche.   

Abstract

The normal human fibroblast cell line WI38 and a transformed derivative, WI38VA13, differentially splice fibronectin pre-mRNA in vivo. As a first step to understand the molecular basis for this regulation of splicing, we examined the ability of WI38 and WI38VA13 nuclear extracts to splice model adenovirus and globin pre-mRNAs. Adenovirus RNA splicing was detected in WI38VA13 but not in WI38 extracts. Likewise, when supplemented with a HeLa post-nuclear supernatant (S100), human beta-globin RNA splicing was detected in WI38VA13 but not in WI38 extracts. The splicing defect in WI38 extracts was associated with a reduced ability to form splicing complexes and with a corresponding decrease in the interaction of U2 small nuclear ribonucleoprotein (snRNP) with the branchsite. These defects did not correlate with a decrease in 65 kD U2AF binding since equivalent U2AF level and activity were detected in WI38 and WI38VA13 extracts. Rather, WI38 extracts displayed reduced ASF/SF2 activity and contained a low level of 30 and 40 kD SR phosphoproteins. Moreover, addition of purified ASF/SF2 dramatically increased splicing complex formation in WI38 extracts. These results raise the possibility that variations in the level and activity of ASF/SF2 and other SR proteins play a role in the regulation of fibronectin splicing.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1408834      PMCID: PMC334305          DOI: 10.1093/nar/20.19.5197

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  31 in total

1.  Cloning and domain structure of the mammalian splicing factor U2AF.

Authors:  P D Zamore; J G Patton; M R Green
Journal:  Nature       Date:  1992-02-13       Impact factor: 49.962

Review 2.  Biochemical mechanisms of constitutive and regulated pre-mRNA splicing.

Authors:  M R Green
Journal:  Annu Rev Cell Biol       Date:  1991

3.  Purification and characterization of pre-mRNA splicing factor SF2 from HeLa cells.

Authors:  A R Krainer; G C Conway; D Kozak
Journal:  Genes Dev       Date:  1990-07       Impact factor: 11.361

4.  A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro.

Authors:  H Ge; J L Manley
Journal:  Cell       Date:  1990-07-13       Impact factor: 41.582

5.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

6.  Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2.

Authors:  A Mayeda; A R Krainer
Journal:  Cell       Date:  1992-01-24       Impact factor: 41.582

7.  Isolation of a complementary DNA that encodes the mammalian splicing factor SC35.

Authors:  X D Fu; T Maniatis
Journal:  Science       Date:  1992-04-24       Impact factor: 47.728

8.  Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro.

Authors:  A R Krainer; T Maniatis
Journal:  Cell       Date:  1985-10       Impact factor: 41.582

9.  Biochemical characterization of U2 snRNP auxiliary factor: an essential pre-mRNA splicing factor with a novel intranuclear distribution.

Authors:  P D Zamore; M R Green
Journal:  EMBO J       Date:  1991-01       Impact factor: 11.598

10.  Monoclonal antibodies in the analysis of fibronectin isoforms generated by alternative splicing of mRNA precursors in normal and transformed human cells.

Authors:  L Borsi; B Carnemolla; P Castellani; C Rosellini; D Vecchio; G Allemanni; S E Chang; J Taylor-Papadimitriou; H Pande; L Zardi
Journal:  J Cell Biol       Date:  1987-03       Impact factor: 10.539

View more
  4 in total

1.  Polypyrimidine track-binding protein binding downstream of caspase-2 alternative exon 9 represses its inclusion.

Authors:  J Côté; S Dupuis; J Y Wu
Journal:  J Biol Chem       Date:  2000-12-14       Impact factor: 5.157

2.  Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor.

Authors:  X Peng; S M Mount
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

3.  Dysregulated RNA polyadenylation contributes to metabolic impairment in non-alcoholic fatty liver disease.

Authors:  Andrew M Jobbins; Nejc Haberman; Natalia Artigas; Christopher Amourda; Helen A B Paterson; Sijia Yu; Samuel J I Blackford; Alex Montoya; Marian Dore; Yi-Fang Wang; Alessandro Sardini; Inês Cebola; Johannes Zuber; Sheikh Tamir Rashid; Boris Lenhard; Santiago Vernia
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

4.  Caspase-2 pre-mRNA alternative splicing: Identification of an intronic element containing a decoy 3' acceptor site.

Authors:  J Coté; S Dupuis; Z Jiang; J Y Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-23       Impact factor: 11.205

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.