Literature DB >> 14043996

QUANTITATIVE APPROACH TO THE STUDY OF BACTERIAL SPECIES.

J LISTON, W WIEBE, R R COLWELL.   

Abstract

Liston, J. (University of Washington, Seattle), W. Wiebe, and R. R. Colwell. Quantitative approach to the study of bacterial species. J. Bacteriol. 85:1061-1070. 1963.-The stability of strains of various species of gram-negative, rod-shaped bacteria was investigated by subculturing each strain through ten different media, testing the substrains so produced through a standard series of tests, and analyzing the resulting data by electronic computer. Strain stability was shown to be high [similarity coefficient (S) >/= 80%], and some evidence was obtained for species stability (S >/= 75%). The limits of variability for a species were studied by use of Pseudomonas aeruginosa; 33 P. aeruginosa strains (from the American Type Culture Collection) were tested and found to share a high level of similarity. An analysis was made of the distribution of positive characters among the strains, and the group was found to have a mean total of 35 characters (out of a possible 78 which were coded and included in the computer analyses) with a range of 33 to 39 positive characters in individual organisms. The frequency of occurrence of each positive character and the probability of mutual occurrence of pairs of positive characters were calculated. By use of the quantitative and qualitative data so obtained, a hypothetical Median Organism for the P. aeruginosa group was derived. The species may then be defined as consisting of all strains which show an S relationship of 75% or more with the Median Organism. The general applicability of this concept is discussed.

Entities:  

Keywords:  AEROBACTER AEROGENES; AEROMONAS; CLASSIFICATION; ESCHERICHIA COLI; EXPERIMENTAL LAB STUDY; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA

Mesh:

Year:  1963        PMID: 14043996      PMCID: PMC278285          DOI: 10.1128/jb.85.5.1061-1070.1963

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  11 in total

1.  Numerical taxonomy.

Authors:  P H SNEATH; R R SOKAL
Journal:  Nature       Date:  1962-03-03       Impact factor: 49.962

2.  Taxonomy of Xanthomonas and Pseudomonas.

Authors:  R R COLWELL; J LISTON
Journal:  Nature       Date:  1961-08-05       Impact factor: 49.962

3.  The Adansonian classification of the staphylococci.

Authors:  L R HILL
Journal:  J Gen Microbiol       Date:  1959-04

4.  Differential diagnosis of Pseudomonas-like microorganisms in the clinical laboratory.

Authors:  W L GABY; E FREE
Journal:  J Bacteriol       Date:  1958-10       Impact factor: 3.490

5.  The application of computers to taxonomy.

Authors:  P H SNEATH
Journal:  J Gen Microbiol       Date:  1957-08

6.  Identification of Pseudomonas pyocyanea by the oxidase reaction.

Authors:  N KOVACS
Journal:  Nature       Date:  1956-09-29       Impact factor: 49.962

7.  A method for the rapid differentiation of certain nonpathogenic, asporogenous bacilli.

Authors:  J M SHEWAN; W HODGKISS
Journal:  Nature       Date:  1954-01-30       Impact factor: 49.962

8.  The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various gram negative bacteria.

Authors:  R HUGH; E LEIFSON
Journal:  J Bacteriol       Date:  1953-07       Impact factor: 3.490

9.  Taxonomic relationships among the pseudomonads.

Authors:  R R COLWELL; J LISTON
Journal:  J Bacteriol       Date:  1961-07       Impact factor: 3.490

10.  Taxonomic analysis with the electronic computer of some Xanthomonas and Pseudomonas species.

Authors:  R R COLWELL; J LISTON
Journal:  J Bacteriol       Date:  1961-12       Impact factor: 3.490

View more
  27 in total

1.  ADANSONIAN ANALYSIS AND DEOXYRIBONUCLEIC ACID BASE COMPOSITION OF SOME GRAM-NEGATIVE BACTERIA.

Authors:  R R COLWELL; M MANDEL
Journal:  J Bacteriol       Date:  1964-06       Impact factor: 3.490

2.  Numerical Taxonomy of Heterotrophic Bacteria Growing in Association with Continuous-Culture Chlorella sorokiniana.

Authors:  C D Litchfield; R R Colwell; J M Prescott
Journal:  Appl Microbiol       Date:  1969-12

3.  Phenotypic study of bacteria associated with the caribbean sclerosponge, Ceratoporella nicholsoni.

Authors:  D L Santavy; P Willenz; R R Colwell
Journal:  Appl Environ Microbiol       Date:  1990-06       Impact factor: 4.792

4.  Physiological characterization of heterotrophic bacterial communities from selected aquatic environments.

Authors:  M Gehlen; H J Trampisch; W Dott
Journal:  Microb Ecol       Date:  1985-09       Impact factor: 4.552

5.  Numerical taxonomy and ecology of petroleum-degrading bacteria.

Authors:  B Austin; J J Calomiris; J D Walker; R R Colwell
Journal:  Appl Environ Microbiol       Date:  1977-07       Impact factor: 4.792

6.  Diversity among strains causing bacterial kidney disease in salmonid fish.

Authors:  B Austin; C J Rodgers
Journal:  Curr Microbiol       Date:  1980-07       Impact factor: 2.188

7.  Comparative study of the aerobic, heterotrophic bacterial flora of Chesapeake Bay and Tokyo Bay.

Authors:  B Austin; S Garges; B Conrad; E E Harding; R R Colwell; U Simidu; N Taga
Journal:  Appl Environ Microbiol       Date:  1979-04       Impact factor: 4.792

8.  Polyphasic taxonomy of the genus vibrio: numerical taxonomy of Vibrio cholerae, Vibrio parahaemolyticus, and related Vibrio species.

Authors:  R R Colwell
Journal:  J Bacteriol       Date:  1970-10       Impact factor: 3.490

9.  Polynucleotide sequence divergence among strains of Escherichia coli and closely related organisms.

Authors:  D J Brenner; G R Fanning; F J Skerman; S Falkow
Journal:  J Bacteriol       Date:  1972-03       Impact factor: 3.490

10.  Numerical taxonomy of psychrotrophic lactic acid bacteria from prepacked meat and meat products.

Authors:  E Borch; G Molin
Journal:  Antonie Van Leeuwenhoek       Date:  1988       Impact factor: 2.271

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.