Literature DB >> 1390759

Detection of internal motions in oligosaccharides by 1H relaxation measurements at different magnetic fields.

M Hricovíni1, R N Shah, J P Carver.   

Abstract

The effect of internal motions on proton relaxation data in oligosaccharides has been investigated experimentally. 1H steady-state and transient NOEs together with 13C T1's have been measured at two magnetic field strengths. The existence of internal motions leads to additional modulations of the dipolar interaction between proton pairs, thus producing a range of spectral density functions for these interactions. As a result, it is possible to show that protons relaxing through fixed distances have a different ratio of relaxation parameters, acquired at 500 and 300 MHz, compared to those relaxing through fluctuating distances. This approach has been used to unequivocally establish for two disaccharides the existence of internal motions on the time scale of the overall tumbling.

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Year:  1992        PMID: 1390759     DOI: 10.1021/bi00156a022

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Assessing glycosidic linkage flexibility: conformational analysis of the repeating trisaccharide unit of Aeromonas salmonicida.

Authors:  T Peters; T Weimar
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

2.  Solution conformations of a trimannoside from nuclear magnetic resonance and molecular dynamics simulations.

Authors:  E W Sayers; J H Prestegard
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

3.  Solution conformation and dynamics of a fungal cell wall polysaccharide isolated from Microsporum gypseum.

Authors:  A Poveda; M Martin-Pastor; M Bernabe; J A Leal; J Jimenez-Barbero
Journal:  Glycoconj J       Date:  1998-03       Impact factor: 2.916

4.  Motional properties of a pentasaccharide containing a 2,6-branched mannose residue as studied by 13C nuclear spin relaxation.

Authors:  L Mäler; G Widmalm; J Kowalewski
Journal:  J Biomol NMR       Date:  1996-01       Impact factor: 2.835

5.  Solution conformation and dynamics of a tetrasaccharide related to the Lewis(x) antigen deduced by NMR relaxation measurements.

Authors:  A Poveda; J L Asensio; M Martín-Pastor; J Jiménez-Barbero
Journal:  J Biomol NMR       Date:  1997-07       Impact factor: 2.835

6.  Conformations and internal mobility of a glycopeptide derived from bromelain using molecular dynamics simulations and NOESY analysis.

Authors:  J P Lommerse; L M Kroon-Batenburg; J Kroon; J P Kamerling; J F Vliegenthart
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

7.  Water accessibility, aggregation, and motional features of polysaccharide-protein conjugate vaccines.

Authors:  Francesco Berti; Paolo Costantino; Marco Fragai; Claudio Luchinat
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

  7 in total

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