Literature DB >> 1380692

The mechanism of trans-activation of the Escherichia coli operon thrU(tufB) by the protein FIS. A model.

H Verbeek1, L Nilsson, L Bosch.   

Abstract

Transcription of the thrU(tufB) operon is trans-activated by the protein FIS which binds to the promoter upstream activator sequence (UAS). Deletions of parts of the UAS and insertions show that optimal trans-activation requires occupation by FIS of the two FIS-binding regions on the UAS and specific helical positioning of these regions. On the basis of these and other data, a model for the mechanism of thrU(tufB) trans-activation by FIS is proposed. This model implies that the mechanisms underlying stimulation by FIS of two totally different processes: inversion of viral DNA segments and transcription of stable RNA operons, are essentially the same.

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Year:  1992        PMID: 1380692      PMCID: PMC334090          DOI: 10.1093/nar/20.15.4077

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  31 in total

1.  Potential binding sites of the trans-activator FIS are present upstream of all rRNA operons and of many but not all tRNA operons.

Authors:  H Verbeek; L Nilsson; G Baliko; L Bosch
Journal:  Biochim Biophys Acta       Date:  1990-08-27

2.  Bipartite functional map of the E. coli RNA polymerase alpha subunit: involvement of the C-terminal region in transcription activation by cAMP-CRP.

Authors:  K Igarashi; A Ishihama
Journal:  Cell       Date:  1991-06-14       Impact factor: 41.582

3.  FIS-dependent trans activation of stable RNA operons of Escherichia coli under various growth conditions.

Authors:  L Nilsson; H Verbeek; E Vijgenboom; C van Drunen; A Vanet; L Bosch
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

4.  Three-dimensional structure of the E. coli DNA-binding protein FIS.

Authors:  D Kostrewa; J Granzin; C Koch; H W Choe; S Raghunathan; W Wolf; J Labahn; R Kahmann; W Saenger
Journal:  Nature       Date:  1991-01-10       Impact factor: 49.962

5.  The Hin invertasome: protein-mediated joining of distant recombination sites at the enhancer.

Authors:  K A Heichman; R C Johnson
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

6.  FIS-dependent trans-activation of tRNA and rRNA operons of Escherichia coli.

Authors:  L Bosch; L Nilsson; E Vijgenboom; H Verbeek
Journal:  Biochim Biophys Acta       Date:  1990-08-27

7.  Small-angle X-ray study of DNA-dependent RNA polymerase holoenzyme from Escherichia coli.

Authors:  O Meisenberger; H Heumann; I Pilz
Journal:  FEBS Lett       Date:  1981-01-12       Impact factor: 4.124

8.  Site-specific DNA inversion is enhanced by a DNA sequence element in cis.

Authors:  H E Huber; S Iida; W Arber; T A Bickle
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

9.  The role of FIS in trans activation of stable RNA operons of E. coli.

Authors:  L Nilsson; A Vanet; E Vijgenboom; L Bosch
Journal:  EMBO J       Date:  1990-03       Impact factor: 11.598

10.  Identification of two functional regions in Fis: the N-terminus is required to promote Hin-mediated DNA inversion but not lambda excision.

Authors:  R Osuna; S E Finkel; R C Johnson
Journal:  EMBO J       Date:  1991-06       Impact factor: 11.598

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  9 in total

1.  Activation of Escherichia coli leuV transcription by FIS.

Authors:  W Ross; J Salomon; W M Holmes; R L Gourse
Journal:  J Bacteriol       Date:  1999-06       Impact factor: 3.490

2.  Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli.

Authors:  C A Hirvonen; W Ross; C E Wozniak; E Marasco; J R Anthony; S E Aiyar; V H Newburn; R L Gourse
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

Review 3.  The regulation of ribosomal RNA synthesis and bacterial cell growth.

Authors:  R Wagner
Journal:  Arch Microbiol       Date:  1994       Impact factor: 2.552

4.  DNA binding and bending are necessary but not sufficient for Fis-dependent activation of rrnB P1.

Authors:  K K Gosink; W Ross; S Leirmo; R Osuna; S E Finkel; R C Johnson; R L Gourse
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

Review 5.  Promoters responsive to DNA bending: a common theme in prokaryotic gene expression.

Authors:  J Pérez-Martín; F Rojo; V de Lorenzo
Journal:  Microbiol Rev       Date:  1994-06

6.  Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media.

Authors:  H Tao; C Bausch; C Richmond; F R Blattner; T Conway
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

7.  FIS and RNA polymerase holoenzyme form a specific nucleoprotein complex at a stable RNA promoter.

Authors:  G Muskhelishvili; A A Travers; H Heumann; R Kahmann
Journal:  EMBO J       Date:  1995-04-03       Impact factor: 11.598

8.  The Escherichia coli FIS protein is not required for the activation of tyrT transcription on entry into exponential growth.

Authors:  L R Lazarus; A A Travers
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

Review 9.  Vitamin B₆ and Its Role in Cell Metabolism and Physiology.

Authors:  Marcelina Parra; Seth Stahl; Hanjo Hellmann
Journal:  Cells       Date:  2018-07-22       Impact factor: 6.600

  9 in total

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