Literature DB >> 1359557

Detecting gene conversion: primate visual pigment genes.

D J Balding1, R A Nichols, D M Hunt.   

Abstract

The effects of gene conversion can be detected in the DNA sequences of multigene families. We develop a permutation test of the significance of patterns of sequence mismatches, and apply it to the sequences of the red- and green-sensitive visual pigment genes of human and the diana monkey. Whereas conventional tests of the rate of sequence divergence are equivocal, the permutation test convincingly excludes divergence in the absence of gene conversion (p = 10(-6)).

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Year:  1992        PMID: 1359557     DOI: 10.1098/rspb.1992.0114

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  15 in total

1.  Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome.

Authors:  Jennifer F Hughes; John M Coffin
Journal:  Genetics       Date:  2005-09-12       Impact factor: 4.562

2.  A revised evolutionary history of the CYP1A subfamily: gene duplication, gene conversion, and positive selection.

Authors:  Heather M H Goldstone; John J Stegeman
Journal:  J Mol Evol       Date:  2006-04-28       Impact factor: 2.395

3.  An exact nonparametric method for inferring mosaic structure in sequence triplets.

Authors:  Maciej F Boni; David Posada; Marcus W Feldman
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

4.  The power of the methods for detecting interlocus gene conversion.

Authors:  Sayaka P Mansai; Hideki Innan
Journal:  Genetics       Date:  2009-11-30       Impact factor: 4.562

5.  Origins and antiquity of X-linked triallelic color vision systems in New World monkeys.

Authors:  S Boissinot; Y Tan; S K Shyue; H Schneider; I Sampaio; K Neiswanger; D Hewett-Emmett; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

6.  Sequence and evolutionary history of the length polymorphism in intron 1 of the human red photopigment gene.

Authors:  M J Meagher; A L Jorgensen; S S Deeb
Journal:  J Mol Evol       Date:  1996-12       Impact factor: 2.395

7.  Frequent nonallelic gene conversion on the human lineage and its effect on the divergence of gene duplicates.

Authors:  Arbel Harpak; Xun Lan; Ziyue Gao; Jonathan K Pritchard
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-14       Impact factor: 11.205

8.  Gene conversion and evolution of Xq28 duplicons involved in recurring inversions causing severe hemophilia A.

Authors:  Richard D Bagnall; Karen L Ayres; Peter M Green; Francesco Giannelli
Journal:  Genome Res       Date:  2005-02       Impact factor: 9.043

9.  Sequence divergence of the red and green visual pigments in great apes and humans.

Authors:  S S Deeb; A L Jorgensen; L Battisti; L Iwasaki; A G Motulsky
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

10.  Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes.

Authors:  R Scott Cornman; Judith H Willis
Journal:  Insect Biochem Mol Biol       Date:  2008-05-19       Impact factor: 4.714

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