Literature DB >> 1342937

Higher rates of amino acid substitution in rodents than in humans.

X Gu1, W H Li.   

Abstract

An analysis of 54 protein sequences from humans and rodents (mice or rats), with the chicken as an outgroup, indicates that, from the common ancestor of primates and rodents, 35 of the proteins have evolved faster in the lineage to mouse or rat (rodent lineage) whereas only 12 proteins have evolved faster in the lineage to humans (human lineage). The average rate of amino acid substitution is significantly faster in the rodent lineage than in the human lineage. In addition, the average rate of insertion/deletion is also faster in rodents than in humans and there is a positive correlation between the rate of amino acid substitution and the rate of insertion/deletion in a protein sequence.

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Year:  1992        PMID: 1342937     DOI: 10.1016/1055-7903(92)90017-b

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  25 in total

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3.  Size of the protein-coding genome and rate of molecular evolution.

Authors:  Zoran A Rajic; Gradimir M Jankovic; Ana Vidovic; Natasa M Milic; Dejan Skoric; Milorad Pavlovic; Vladimir Lazarevic
Journal:  J Hum Genet       Date:  2005-05-10       Impact factor: 3.172

4.  There is no universal molecular clock for invertebrates, but rate variation does not scale with body size.

Authors:  Jessica A Thomas; John J Welch; Megan Woolfit; Lindell Bromham
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-01       Impact factor: 11.205

5.  The neoselectionist theory of genome evolution.

Authors:  Giorgio Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

6.  Molecular evolution of PKD2 gene family in mammals.

Authors:  Chun Ye; Huan Sun; Wenhu Guo; Yuquan Wei; Qin Zhou
Journal:  Genetica       Date:  2009-02-01       Impact factor: 1.082

7.  Age at first reproduction explains rate variation in the strepsirrhine molecular clock.

Authors:  C Tsantes; M E Steiper
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-19       Impact factor: 11.205

8.  Erratic overdispersion of three molecular clocks: GPDH, SOD, and XDH.

Authors:  F Rodríguez-Trelles; R Tarrío; F J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

9.  A generalized least-squares estimate for the origin of sporophytic self-incompatibility.

Authors:  M K Uyenoyama
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

10.  The effect of branch lengths on phylogeny: an empirical study using highly conserved orthologs from mammalian genomes.

Authors:  Austin L Hughes; Robert Friedman
Journal:  Mol Phylogenet Evol       Date:  2007-05-18       Impact factor: 4.286

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