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Literature DB >> 1334908

Ty1-copia group retrotransposons and the evolution of retroelements in the eukaryotes.

Abstract

Ty1-copia group retrotransposons are among the best studied transposable elements in the eukaryotes. This review discusses the extent of these transposons in the eukaryote kingdoms and compares models for the evolution of these genetic elements in the light of recent phylogenetic data. These data show that the Ty1-copia group is widespread among invertebrate eukaryotes, especially in the higher plant kingdom, where these genetic elements are unusually common and heterogeneous in their sequence. The phylogenetic data also suggest that the present day spectrum of Ty1-copia group retrotransposons has been influenced both by divergence during vertical transmission down evolving lineages and by horizontal transmission between distantly related species. Lastly, the factors affecting Ty1-copia group retrotransposon copy number and sequence heterogeneity in eukaryotic genomes and the effects of transpositional quiescence and defective retrotransposons upon evolution of Ty1-copia group retrotransposons are discussed.

Mesh：

Substances：

Year: 1992 PMID： 1334908 DOI： 10.1007/bf00133721

Source DB: PubMed Journal: Genetica ISSN： 0016-6707 Impact factor: 1.082

54 in total

1. Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.

Authors: J Clare; P Farabaugh
Journal: Proc Natl Acad Sci U S A Date: 1985-05 Impact factor: 11.205

2. Nearest neighbor procedure for relating progressively aligned amino acid sequences.

Authors: R F Doolittle; D F Feng
Journal: Methods Enzymol Date: 1990 Impact factor: 1.600

Review 3. Origins and evolutionary relationships of retroviruses.

Authors: R F Doolittle; D F Feng; M S Johnson; M A McClure
Journal: Q Rev Biol Date: 1989-03 Impact factor: 4.875

Review 4. The intracisternal A-particle gene family: structure and functional aspects.

Authors: E L Kuff; K K Lueders
Journal: Adv Cancer Res Date: 1988 Impact factor: 6.242

5. Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster.

Authors: T Shiba; K Saigo
Journal: Nature Date: 1983-03-10 Impact factor: 49.962

6. The 5' termini of RNAs encoded by the transposable element copia.

Authors: A J Flavell; R Levis; M A Simon; G M Rubin
Journal: Nucleic Acids Res Date: 1981-12-11 Impact factor: 16.971

7. Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics.

Authors: M A Grandbastien; A Spielmann; M Caboche
Journal: Nature Date: 1989-01-26 Impact factor: 49.962

8. Transposition of elements of the 412, copia and 297 dispersed repeated gene families in Drosophila.

Authors: S S Potter; W J Brorein; P Dunsmuir; G M Rubin
Journal: Cell Date: 1979-06 Impact factor: 41.582

9. Genetic events associated with an insertion mutation in yeast.

Authors: D T Chaleff; G R Fink
Journal: Cell Date: 1980-08 Impact factor: 41.582

10. Evidence for a common evolutionary origin of inverted repeat transposons in Drosophila and plants: hobo, Activator, and Tam3.

Authors: B R Calvi; T J Hong; S D Findley; W M Gelbart
Journal: Cell Date: 1991-08-09 Impact factor: 41.582

17 in total

9. Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome.

Authors: T Schmidt; S Kubis; J S Heslop-Harrison
Journal: Chromosome Res Date: 1995-09 Impact factor: 5.239

Review 10. Horizontal transfer of P elements and other short inverted repeat transposons.

Authors: M G Kidwell
Journal: Genetica Date: 1992 Impact factor: 1.082

Ty1-copia group retrotransposons and the evolution of retroelements in the eukaryotes.

1. Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.

2. Nearest neighbor procedure for relating progressively aligned amino acid sequences.

Review 3. Origins and evolutionary relationships of retroviruses.

Review 4. The intracisternal A-particle gene family: structure and functional aspects.

5. Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster.

6. The 5' termini of RNAs encoded by the transposable element copia.

7. Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics.

8. Transposition of elements of the 412, copia and 297 dispersed repeated gene families in Drosophila.

9. Genetic events associated with an insertion mutation in yeast.

10. Evidence for a common evolutionary origin of inverted repeat transposons in Drosophila and plants: hobo, Activator, and Tam3.

Review 1. Transposons and genome evolution in plants.

2. Evidence for the recent horizontal transfer of long terminal repeat retrotransposon.

3. Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome.

4. The diversity of retroelements in diploid and allotetraploid Brassica species.

5. Easel, a gypsy LTR-retrotransposon in the Salmonidae.

Review 6. Primer tRNAs for reverse transcription.

7. A retrotransposon-like sequence linked to the S-locus of Nicotiana alata is expressed in styles in response to touch.

8. Evolution of DNA sequence nonhomologies among maize inbreds.

9. Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome.

Review 10. Horizontal transfer of P elements and other short inverted repeat transposons.