Literature DB >> 1325480

Epstein Barr virus (EBV) encoded small RNAs: targets for detection by in situ hybridisation with oligonucleotide probes.

G Khan1, P J Coates, H O Kangro, G Slavin.   

Abstract

AIMS: To develop a rapid, sensitive, and specific non-isotopic in situ hybridisation (NISH) procedure for the detection of Epstein-Barr virus in formalin fixed, paraffin wax embedded tissues.
METHODS: Two low molecular weight RNAs, designated EBER-1 and EBER-2 (Epstein-Barr encoded RNA), were used: cells latently infected with EBV secrete large amounts of EBERs. The method uses digoxigenin labelled anti-sense oligonucleotides, corresponding to sequences in EBER-1 and EBER-2.
RESULTS: The use of these probes, in conjunction with high temperature microwave denaturation, ensured that the technique was considerably more sensitive than other in situ hybridisation techniques for detecting EBV. Furthermore, the hybridisation signal was morphologically distinct in that only the nucleus and not the nucleolus give a positive signal. No cross-hybridisation was observed with cells infected with other lymphotropic herpes viruses.
CONCLUSION: The sensitivity, simplicity, and rapidity of this technique make it ideal for diagnostic use, and for studies investigating the role of this virus in neoplastic disease.

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Year:  1992        PMID: 1325480      PMCID: PMC495191          DOI: 10.1136/jcp.45.7.616

Source DB:  PubMed          Journal:  J Clin Pathol        ISSN: 0021-9746            Impact factor:   3.411


  30 in total

1.  VIRUS PARTICLES IN CULTURED LYMPHOBLASTS FROM BURKITT'S LYMPHOMA.

Authors:  M A EPSTEIN; B G ACHONG; Y M BARR
Journal:  Lancet       Date:  1964-03-28       Impact factor: 79.321

2.  Detection of Epstein-Barr viral genomes in Reed-Sternberg cells of Hodgkin's disease.

Authors:  L M Weiss; L A Movahed; R A Warnke; J Sklar
Journal:  N Engl J Med       Date:  1989-02-23       Impact factor: 91.245

3.  Structural analyses of EBER1 and EBER2 ribonucleoprotein particles present in Epstein-Barr virus-infected cells.

Authors:  J N Glickman; J G Howe; J A Steitz
Journal:  J Virol       Date:  1988-03       Impact factor: 5.103

4.  EBV DNA in biopsies of Burkitt tumours and anaplastic carcinomas of the nasopharynx.

Authors:  H zur Hausen; H Schulte-Holthausen; G Klein; W Henle; G Henle; P Clifford; L Santesson
Journal:  Nature       Date:  1970-12-12       Impact factor: 49.962

5.  Transformation of foetal human keukocytes in vitro by filtrates of a human leukaemic cell line containing herpes-like virus.

Authors:  J H Pope; M K Horne; W Scott
Journal:  Int J Cancer       Date:  1968-11-15       Impact factor: 7.396

6.  Detection of EBV gene expression in Reed-Sternberg cells of Hodgkin's disease.

Authors:  T C Wu; R B Mann; P Charache; S D Hayward; S Staal; B C Lambe; R F Ambinder
Journal:  Int J Cancer       Date:  1990-11-15       Impact factor: 7.396

7.  Demonstration of Epstein-Barr virus in primary central nervous system lymphomas by the polymerase chain reaction and in situ hybridization.

Authors:  E Rouah; B B Rogers; D R Wilson; J B Kirkpatrick; G J Buffone
Journal:  Hum Pathol       Date:  1990-05       Impact factor: 3.466

8.  Aggressive peripheral T-cell lymphomas containing Epstein-Barr viral DNA: a clinicopathologic and molecular analysis.

Authors:  I J Su; H C Hsieh; K H Lin; W C Uen; C L Kao; C J Chen; A L Cheng; M E Kadin; J Y Chen
Journal:  Blood       Date:  1991-02-15       Impact factor: 22.113

9.  Infection of normal human epithelial cells by Epstein-Barr virus.

Authors:  I M Shapiro; D J Volsky
Journal:  Science       Date:  1983-03-11       Impact factor: 47.728

10.  Isolation and characterization of the genes for two small RNAs of herpesvirus papio and their comparison with Epstein-Barr virus-encoded EBER RNAs.

Authors:  J G Howe; M D Shu
Journal:  J Virol       Date:  1988-08       Impact factor: 5.103

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  29 in total

Review 1.  Molecular diagnosis of Epstein-Barr virus-related diseases.

Authors:  M L Gulley
Journal:  J Mol Diagn       Date:  2001-02       Impact factor: 5.568

2.  DNA viruses in the pathogenesis of sporadic chronic idiopathic intestinal pseudo-obstruction.

Authors:  H S Debinski; M A Kamm; I C Talbot; G Khan; H O Kangro; D J Jeffries
Journal:  Gut       Date:  1997-07       Impact factor: 23.059

3.  A paper-based platform for detection of viral RNA.

Authors:  Daohong Zhang; David Broyles; Eric A Hunt; Emre Dikici; Sylvia Daunert; Sapna K Deo
Journal:  Analyst       Date:  2017-02-27       Impact factor: 4.616

4.  Improved prognosis of Epstein-Barr virus associated childhood Hodgkin's lymphoma: study of 47 South African cases.

Authors:  M Engel; M F Essop; P Close; P Hartley; G Pallesen; C Sinclair-Smith
Journal:  J Clin Pathol       Date:  2000-03       Impact factor: 3.411

Review 5.  The molecular march of primary and recurrent nasopharyngeal carcinoma.

Authors:  Nicholas J Campion; Munira Ally; Bernhard J Jank; Jahangir Ahmed; Ghassan Alusi
Journal:  Oncogene       Date:  2021-01-21       Impact factor: 9.867

6.  A collaborative nationwide lymphoma study in Lebanon: incidence of various subtypes and analysis of associations with viruses.

Authors:  Zaher K Otrock; Jad Saab; Georges Aftimos; Fady Nasr; Fadi S Farhat; Saad Khairallah; Gérard Abadjian; Marwan Ghosn; Hassan Sidani; Ahmad Ibrahim; Ayman Tawil; Claude Ghorra; Zarouhie Meguerian; Walid Mokaddem; Walid Dayeh; Ziad Salem; Georges Chahine; Nizar Bitar; Anas Mugharbel; Joseph Makdessi; Christina Khater; Mirna El Hajj; Dany Abi Gerges; Charles Sfeir; Joseph Kattan; Khaled Ibrahim; Michel Saade; Hussein Sadek; Rami A Mahfouz; Mohamed A Kharfan-Dabaja; Ghazi Zaatari; Ali Bazarbachi
Journal:  Pathol Oncol Res       Date:  2013-05-08       Impact factor: 3.201

Review 7.  The small RNAs of Epstein-Barr virus.

Authors:  M J Clemens
Journal:  Mol Biol Rep       Date:  1993-02       Impact factor: 2.316

8.  Epstein-Barr virus infection and bcl-2 proto-oncogene expression. Separate events in the pathogenesis of Hodgkin's disease?

Authors:  G Khan; R K Gupta; P J Coates; G Slavin
Journal:  Am J Pathol       Date:  1993-11       Impact factor: 4.307

Review 9.  Translational Mini-Review Series on B cell subsets in disease. B cells in multiple sclerosis: drivers of disease pathogenesis and Trojan horse for Epstein-Barr virus entry to the central nervous system?

Authors:  U-C Meier; G Giovannoni; J S Tzartos; G Khan
Journal:  Clin Exp Immunol       Date:  2012-01       Impact factor: 4.330

10.  Lymphoid hyperplasia and lymphoma in transgenic mice expressing the small non-coding RNA, EBER1 of Epstein-Barr virus.

Authors:  Claire E Repellin; Penelope M Tsimbouri; Adrian W Philbey; Joanna B Wilson
Journal:  PLoS One       Date:  2010-02-08       Impact factor: 3.240

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