Literature DB >> 1313970

Cis and trans regulatory elements required for regulation of the CHO1 gene of Saccharomyces cerevisiae.

A M Bailis1, J M Lopes, S D Kohlwein, S A Henry.   

Abstract

A 34 base-pair (bp) fragment spanning sequences -154 to -120 of the promoter of the CHO1 gene (structural gene for phosphatidylserine synthase) from the yeast Saccharomyces cerevisiae has been shown to place transcription of a promoter-less Escherichia coli lacZ gene under control of the phospholipid precursors inositol and choline. Furthermore, in deletion experiments the CHO1 UASINO was localized to sequences between -151 and -123 of the CHO1 promoter. A nine bp sequence was identified in the promoter region of the CHO1 gene that shares an eight out of nine bp match with a sequence (consensus 5' ATGTGAAAT 3') that is repeated a total of 23 times upstream from several coregulated phospholipid biosynthetic genes. This sequence is contained within the -151 to -123 region to which the CHO1 UAS has been localized. The nine bp repeated element is believed to be involved in the control of phospholipid biosynthetic gene transcription in response to changing levels of inositol and choline in the growth medium. This control has been shown to require activities encoded by the products of the three regulatory genes: INO2, INO4, and OPI1. A mutation in any of these regulatory genes results in aberrant CHO1-lacZ gene regulation, and affects regulation of the construct containing the 34 bp (-154 to -120) CHO1 fragment demonstrating that the regulatory signal generated by these genes interacts with the 5' end of the CHO1 gene.

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Year:  1992        PMID: 1313970      PMCID: PMC312191          DOI: 10.1093/nar/20.6.1411

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  35 in total

1.  Nucleotide sequence and characterization of the yeast PSS gene encoding phosphatidylserine synthase.

Authors:  J Nikawa; Y Tsukagoshi; T Kodaki; S Yamashita
Journal:  Eur J Biochem       Date:  1987-08-17

2.  Yeast/E. coli shuttle vectors with multiple unique restriction sites.

Authors:  J E Hill; A M Myers; T J Koerner; A Tzagoloff
Journal:  Yeast       Date:  1986-09       Impact factor: 3.239

Review 3.  Phospholipid biosynthesis in yeast.

Authors:  G M Carman; S A Henry
Journal:  Annu Rev Biochem       Date:  1989       Impact factor: 23.643

4.  Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.

Authors:  D B Clewell; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1969-04       Impact factor: 11.205

5.  Saturation mutagenesis of a yeast his3 "TATA element": genetic evidence for a specific TATA-binding protein.

Authors:  W Chen; K Struhl
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

6.  The membrane-associated enzyme phosphatidylserine synthase is regulated at the level of mRNA abundance.

Authors:  A M Bailis; M A Poole; G M Carman; S A Henry
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

7.  Expression of the Saccharomyces cerevisiae inositol-1-phosphate synthase (INO1) gene is regulated by factors that affect phospholipid synthesis.

Authors:  J P Hirsch; S A Henry
Journal:  Mol Cell Biol       Date:  1986-10       Impact factor: 4.272

8.  The relationship between the "TATA" sequence and transcription initiation sites at the HIS4 gene of Saccharomyces cerevisiae.

Authors:  F Nagawa; G R Fink
Journal:  Proc Natl Acad Sci U S A       Date:  1985-12       Impact factor: 11.205

9.  The major promoter element of rRNA transcription in yeast lies 2 kb upstream.

Authors:  E A Elion; J R Warner
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

10.  Coordinate regulation of phospholipid biosynthesis in Saccharomyces cerevisiae: pleiotropically constitutive opi1 mutant.

Authors:  L S Klig; M J Homann; G M Carman; S A Henry
Journal:  J Bacteriol       Date:  1985-06       Impact factor: 3.490

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  27 in total

1.  Combinatorial regulation of phospholipid biosynthetic gene expression by the UME6, SIN3 and RPD3 genes.

Authors:  M Elkhaimi; M R Kaadige; D Kamath; J C Jackson; H Biliran; J M Lopes
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

2.  Genome-wide analysis reveals inositol, not choline, as the major effector of Ino2p-Ino4p and unfolded protein response target gene expression in yeast.

Authors:  Stephen A Jesch; Xin Zhao; Martin T Wells; Susan A Henry
Journal:  J Biol Chem       Date:  2004-12-20       Impact factor: 5.157

Review 3.  Roles for inositol polyphosphate kinases in the regulation of nuclear processes and developmental biology.

Authors:  Andrew M Seeds; Joshua P Frederick; Marco M K Tsui; John D York
Journal:  Adv Enzyme Regul       Date:  2007-01-05

Review 4.  Genetic regulation of phospholipid biosynthesis in Saccharomyces cerevisiae.

Authors:  M L Greenberg; J M Lopes
Journal:  Microbiol Rev       Date:  1996-03

Review 5.  Regulation of phospholipid synthesis in Saccharomyces cerevisiae by zinc depletion.

Authors:  George M Carman; Gil-Soo Han
Journal:  Biochim Biophys Acta       Date:  2006-05-19

6.  A downstream regulatory element located within the coding sequence mediates autoregulated expression of the yeast fatty acid synthase gene FAS2 by the FAS1 gene product.

Authors:  P Wenz; S Schwank; U Hoja; H J Schüller
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

7.  Regulation of the yeast INO1 gene. The products of the INO2, INO4 and OPI1 regulatory genes are not required for repression in response to inositol.

Authors:  J A Graves; S A Henry
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

Review 8.  The response to inositol: regulation of glycerolipid metabolism and stress response signaling in yeast.

Authors:  Susan A Henry; Maria L Gaspar; Stephen A Jesch
Journal:  Chem Phys Lipids       Date:  2014-01-10       Impact factor: 3.329

9.  Respiratory deficiency mediates the regulation of CHO1-encoded phosphatidylserine synthase by mRNA stability in Saccharomyces cerevisiae.

Authors:  Hyeon-Son Choi; George M Carman
Journal:  J Biol Chem       Date:  2007-08-30       Impact factor: 5.157

10.  The INO1 promoter of Saccharomyces cerevisiae includes an upstream repressor sequence (URS1) common to a diverse set of yeast genes.

Authors:  J M Lopes; K L Schulze; J W Yates; J P Hirsch; S A Henry
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

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