Literature DB >> 12974622

Impact of proline residues on parvalbumin stability.

Sayeh Agah1, John D Larson, Michael T Henzl.   

Abstract

Despite its higher net charge and reduced opportunities for favorable tertiary interactions, Ca(2+)-free rat beta-parvalbumin is more stable than rat alpha-parvalbumin. Under conditions wherein alpha denatures at 45.8 degrees C, beta denatures at 53.6 degrees. The homologous chicken beta isoform known as CPV3 also exhibits heightened stability-prompting an inquiry into the stabilizing influence of Pro-21 and Pro-26. Individual P21A and P26A mutations lower the T(m) of rat beta by 3.2 degrees, decreasing conformational stability by 0.74 kcal/mol. Simultaneous replacement of Pro-21 and Pro-26 essentially abolishes the excess stability (DeltaT(m) = -7.6 degrees; DeltaDeltaG(conf) = -1.77 kcal/mol). Significantly, the P21A/P26A variant displays Ca(2+) affinity virtually indistinguishable from wild-type beta, implying that structural alterations in the AB domain do not necessarily influence the divalent ion affinity of the CD-EF domain. The consequences of introducing proline at positions 21 and 26 in rat alpha were also examined. Whereas the H26P mutation raises the T(m) by 5.6 degrees (DeltaDeltaG(conf) = 1.25 kcal/mol), A21P lowers the T(m) by 8.5 degrees (DeltaDeltaG(conf) = -1.9 kcal/mol). Replacement of Ala-21 by proline in an alpha AB/beta CD-EF chimera increases the T(m) by 5.8 degrees (DeltaDeltaG(conf) = 0.95 kcal/mol), implying that the destabilization of alpha by Pro-21 results from steric conflict with a residue in the CD-EF domain. Consistent with that hypothesis, the K80S mutation markedly stabilizes alpha A21P, yielding a protein with a T(m) 2.0 degrees higher than wild-type alpha. The observed differences in stability resulting from proline addition/removal are largely consistent with alterations in main-chain and side-chain conformational entropy.

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Year:  2003        PMID: 12974622     DOI: 10.1021/bi034721x

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Crystal structure of rat alpha-parvalbumin at 1.05 Angstrom resolution.

Authors:  Christopher A Bottoms; Jonathan P Schuermann; Sayeh Agah; Michael T Henzl; John J Tanner
Journal:  Protein Sci       Date:  2004-05-28       Impact factor: 6.725

2.  Increasing protein stability by improving beta-turns.

Authors:  Hailong Fu; Gerald R Grimsley; Abbas Razvi; J Martin Scholtz; C Nick Pace
Journal:  Proteins       Date:  2009-11-15

3.  Engineering Proteins for Thermostability with iRDP Web Server.

Authors:  Priyabrata Panigrahi; Manas Sule; Avinash Ghanate; Sureshkumar Ramasamy; C G Suresh
Journal:  PLoS One       Date:  2015-10-05       Impact factor: 3.240

Review 4.  Parvalbumin Role in Epilepsy and Psychiatric Comorbidities: From Mechanism to Intervention.

Authors:  Lívea Dornela Godoy; Tamiris Prizon; Matheus Teixeira Rossignoli; João Pereira Leite; José Luiz Liberato
Journal:  Front Integr Neurosci       Date:  2022-02-17

5.  Understanding Ion Binding Affinity and Selectivity in β-Parvalbumin Using Molecular Dynamics and Mean Spherical Approximation Theory.

Authors:  Amir N Kucharski; Caitlin E Scott; Jonathan P Davis; Peter M Kekenes-Huskey
Journal:  J Phys Chem B       Date:  2016-07-01       Impact factor: 2.991

6.  Structural Changes beyond the EF-Hand Contribute to Apparent Calcium Binding Affinities: Insights from Parvalbumins.

Authors:  Kalyan Immadisetty; Bin Sun; Peter M Kekenes-Huskey
Journal:  J Phys Chem B       Date:  2021-06-11       Impact factor: 3.466

  6 in total

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