Literature DB >> 12971716

The principles of nuclear structure.

Dean A Jackson1.   

Abstract

In multicellular eukaryotes, chromatin function is regulated by numerous extremely sophisticated mechanisms. Recent developments in our ability to monitor the organization and dynamic properties of the components involved in processes such as gene expression and DNA synthesis have emphasised how both global nuclear architecture and chromosome structure can influence these fundamental processes. This review sets out to evaluate our present views of the principles that dictate nuclear structure. Particular emphasis is placed on architectural themes and the concept of spatial epigenetics.

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Year:  2003        PMID: 12971716     DOI: 10.1023/a:1024954123092

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   4.620


  90 in total

1.  Chromatin motion is constrained by association with nuclear compartments in human cells.

Authors:  Jonathan R Chubb; Shelagh Boyle; Paul Perry; Wendy A Bickmore
Journal:  Curr Biol       Date:  2002-03-19       Impact factor: 10.834

2.  Protein constitution of the chromosome axis.

Authors:  Deepesh N De
Journal:  Chromosoma       Date:  2002-03-21       Impact factor: 4.316

3.  Higher order arrangement of the eukaryotic nuclear bodies.

Authors:  I-Fan Wang; Narsa M Reddy; C-K James Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-02       Impact factor: 11.205

4.  The MAR-binding protein SATB1 orchestrates temporal and spatial expression of multiple genes during T-cell development.

Authors:  J D Alvarez; D H Yasui; H Niida; T Joh; D Y Loh; T Kohwi-Shigematsu
Journal:  Genes Dev       Date:  2000-03-01       Impact factor: 11.361

5.  Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei.

Authors:  D A Jackson; F J Iborra; E M Manders; P R Cook
Journal:  Mol Biol Cell       Date:  1998-06       Impact factor: 4.138

6.  Visualization of single RNA transcripts in situ.

Authors:  A M Femino; F S Fay; K Fogarty; R H Singer
Journal:  Science       Date:  1998-04-24       Impact factor: 47.728

7.  SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements.

Authors:  O Nayler; W Strätling; J P Bourquin; I Stagljar; L Lindemann; H Jasper; A M Hartmann; F O Fackelmayer; A Ullrich; S Stamm
Journal:  Nucleic Acids Res       Date:  1998-08-01       Impact factor: 16.971

8.  Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei.

Authors:  Ruth R E Williams; Simon Broad; Denise Sheer; Jiannis Ragoussis
Journal:  Exp Cell Res       Date:  2002-01-15       Impact factor: 3.905

Review 9.  Experimental observations of a nuclear matrix.

Authors:  J Nickerson
Journal:  J Cell Sci       Date:  2001-02       Impact factor: 5.285

10.  Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing.

Authors:  Paula Sacco-Bubulya; David L Spector
Journal:  J Cell Biol       Date:  2002-02-04       Impact factor: 10.539

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  13 in total

1.  Understanding nuclear organization: when information becomes knowledge. Workshop on Nuclear Organization.

Authors:  Dean Jackson
Journal:  EMBO Rep       Date:  2005-03       Impact factor: 8.807

2.  Dynamics of nuclear matrix proteome during embryonic development in Drosophila melanogaster.

Authors:  Parul Varma; Rakesh K Mishra
Journal:  J Biosci       Date:  2011-08       Impact factor: 1.826

3.  The C-terminal domain of coilin interacts with Sm proteins and U snRNPs.

Authors:  Hongzhi Xu; Ramesh S Pillai; Teldja N Azzouz; Karl B Shpargel; Christian Kambach; Michael D Hebert; Daniel Schümperli; A Gregory Matera
Journal:  Chromosoma       Date:  2005-07-08       Impact factor: 4.316

4.  Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases.

Authors:  Zhe Liu; William T Garrard
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

5.  Nuclear distribution of actin and myosin I depends on transcriptional activity of the cell.

Authors:  Katarína Kyselá; Anatoly A Philimonenko; Vlada V Philimonenko; Jirí Janácek; Michal Kahle; Pavel Hozák
Journal:  Histochem Cell Biol       Date:  2005-11-03       Impact factor: 4.304

6.  The alphaherpesvirus US3/ORF66 protein kinases direct phosphorylation of the nuclear matrix protein matrin 3.

Authors:  Angela Erazo; Michael B Yee; Bruce W Banfield; Paul R Kinchington
Journal:  J Virol       Date:  2010-10-20       Impact factor: 5.103

7.  Protein Tpr is required for establishing nuclear pore-associated zones of heterochromatin exclusion.

Authors:  Sandra Krull; Julia Dörries; Björn Boysen; Sonja Reidenbach; Lars Magnius; Helene Norder; Johan Thyberg; Volker C Cordes
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

8.  Complex life forms may arise from electrical processes.

Authors:  Edward C Elson
Journal:  Theor Biol Med Model       Date:  2010-06-24       Impact factor: 2.432

9.  Modulation of gene expression in U251 glioblastoma cells by binding of mutant p53 R273H to intronic and intergenic sequences.

Authors:  Marie Brázdová; Timo Quante; Lars Tögel; Korden Walter; Christine Loscher; Vlastimil Tichý; Lenka Cincárová; Wolfgang Deppert; Genrich V Tolstonog
Journal:  Nucleic Acids Res       Date:  2009-01-12       Impact factor: 16.971

Review 10.  Replication forks, chromatin loops and dormant replication origins.

Authors:  J Julian Blow; Xin Quan Ge
Journal:  Genome Biol       Date:  2008-12-30       Impact factor: 13.583

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