Literature DB >> 12963116

Construction of a gamete-enriched gene pool and RNAi-mediated functional analysis in Dictyostelium discoideum.

Tetsuya Muramoto1, Katsuya Suzuki, Hajime Shimizu, Yuji Kohara, Eiko Kohriki, Shinji Obara, Yoshimasa Tanaka, Hideko Urushihara.   

Abstract

Macrocysts in Dictyostelium discoideum possess prototypic features of sexual reproduction and are useful for understanding the basic mechanisms of the reproductive process. Here, we randomly analyzed 1,071 gamete cDNAs, and then constructed a gamete-specific subtraction library, FC-IC. Nucleotide sequences of all 903 FC-IC clones were determined and clustered into 272 independent genes. Expression analysis based on real-time RT-PCR revealed 67 gamete-enriched genes, among which those involved in 'signal transduction' and 'multicellular organization' are prevalent. One of them, FC-IC0003, appeared also to be mating-type specific, and was named gmsA. RNAi-mediated silencing as well as disruption of gmsA reduced the cellular competency for sexual cell fusion, indicating the involvement of this gene in the sexual development of D. discoideum.

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Year:  2003        PMID: 12963116     DOI: 10.1016/s0925-4773(03)00136-9

Source DB:  PubMed          Journal:  Mech Dev        ISSN: 0925-4773            Impact factor:   1.882


  15 in total

1.  GBF-dependent family genes morphologically suppress the partially active Dictyostelium STATa strain.

Authors:  Nao Shimada; Naoko Kanno-Tanabe; Kakeru Minemura; Takefumi Kawata
Journal:  Dev Genes Evol       Date:  2008-01-18       Impact factor: 0.900

2.  A surface glycoprotein indispensable for gamete fusion in the social amoeba Dictyostelium discoideum.

Authors:  Yoshinori Araki; Hideki D Shimizu; Kentaro Saeki; Marina Okamoto; Lixy Yamada; Kentaro Ishida; Hitoshi Sawada; Hideko Urushihara
Journal:  Eukaryot Cell       Date:  2012-03-02

3.  CRISPR/Cas9-based genome-wide screening of Dictyostelium.

Authors:  Takanori Ogasawara; Jun Watanabe; Remi Adachi; Yusuke Ono; Yoichiro Kamimura; Tetsuya Muramoto
Journal:  Sci Rep       Date:  2022-07-02       Impact factor: 4.996

4.  Analyses of cDNAs from growth and slug stages of Dictyostelium discoideum.

Authors:  Hideko Urushihara; Takahiro Morio; Tamao Saito; Yuji Kohara; Eiko Koriki; Hiroshi Ochiai; Mineko Maeda; Jeffrey G Williams; Ikuo Takeuchi; Yoshimasa Tanaka
Journal:  Nucleic Acids Res       Date:  2004-03-09       Impact factor: 16.971

5.  Sex determination in the social amoeba Dictyostelium discoideum.

Authors:  Gareth Bloomfield; Jason Skelton; Alasdair Ivens; Yoshimasa Tanaka; Robert R Kay
Journal:  Science       Date:  2010-12-10       Impact factor: 47.728

6.  Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum.

Authors:  Richard Sucgang; Alan Kuo; Xiangjun Tian; William Salerno; Anup Parikh; Christa L Feasley; Eileen Dalin; Hank Tu; Eryong Huang; Kerrie Barry; Erika Lindquist; Harris Shapiro; David Bruce; Jeremy Schmutz; Asaf Salamov; Petra Fey; Pascale Gaudet; Christophe Anjard; M Madan Babu; Siddhartha Basu; Yulia Bushmanova; Hanke van der Wel; Mariko Katoh-Kurasawa; Christopher Dinh; Pedro M Coutinho; Tamao Saito; Marek Elias; Pauline Schaap; Robert R Kay; Bernard Henrissat; Ludwig Eichinger; Francisco Rivero; Nicholas H Putnam; Christopher M West; William F Loomis; Rex L Chisholm; Gad Shaulsky; Joan E Strassmann; David C Queller; Adam Kuspa; Igor V Grigoriev
Journal:  Genome Biol       Date:  2011-02-28       Impact factor: 13.583

7.  The dictyostelium kinome--analysis of the protein kinases from a simple model organism.

Authors:  Jonathan M Goldberg; Gerard Manning; Allen Liu; Petra Fey; Karen E Pilcher; Yanji Xu; Janet L Smith
Journal:  PLoS Genet       Date:  2006-03-31       Impact factor: 5.917

8.  Knock-in and precise nucleotide substitution using near-PAMless engineered Cas9 variants in Dictyostelium discoideum.

Authors:  Yuu Asano; Kensuke Yamashita; Aoi Hasegawa; Takanori Ogasawara; Hoshie Iriki; Tetsuya Muramoto
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

9.  A comparative sequence analysis reveals a common GBD/FH3-FH1-FH2-DAD architecture in formins from Dictyostelium, fungi and metazoa.

Authors:  Francisco Rivero; Tetsuya Muramoto; Ann-Kathrin Meyer; Hideko Urushihara; Taro Q P Uyeda; Chikako Kitayama
Journal:  BMC Genomics       Date:  2005-03-01       Impact factor: 3.969

10.  Gamete signalling underlies the evolution of mating types and their number.

Authors:  Zena Hadjivasiliou; Andrew Pomiankowski
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-19       Impact factor: 6.237

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