Literature DB >> 12956525

Rice gene expression in response to N-acetylchitooligosaccharide elicitor: comprehensive analysis by DNA microarray with randomly selected ESTs.

Chiharu Akimoto-Tomiyama1, Katsumi Sakata, Junshi Yazaki, Keiko Nakamura, Fumiko Fujii, Kanako Shimbo, Kimiko Yamamoto, Takuji Sasaki, Naoki Kishimoto, Shoshi Kikuchi, Naoto Shibuya, Eiichi Minami.   

Abstract

N-acetylchitooligosaccharides are potent elicitors to suspension-cultured rice cells, inducing a set of defense reactions. Expression of defense-related genes is considered to play an important role in defense reactions, and we employed microarray analysis of 8987 randomly selected expressed sequence tags to analyze the changes in gene expression caused by N-acetylchitooctaose. In this experiment, 166 genes were significantly induced and 93 genes were repressed. RNA gel blot analysis of 16 of these genes confirmed the microarray results. Of the 259 ESTs identified as responsive to N-acetylchytooctaose, 18 genes are related to signal transduction, including five calcium-dependent protein kinases (CDPKs). Among these, three novel CDPKs responsive to N-acetylchitooctaose were isolated.

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Year:  2003        PMID： 12956525     DOI： 10.1023/a:1024890601888

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN： 0167-4412            Impact factor:   4.076


  30 in total

1.  Phosphorylation of phenylalanine ammonia-lyase: evidence for a novel protein kinase and identification of the phosphorylated residue.

Authors:  E G Allwood; D R Davies; C Gerrish; B E Ellis; G P Bolwell
Journal:  FEBS Lett       Date:  1999-08-20       Impact factor: 4.124

Review 2.  Signal transmission in the plant immune response.

Authors:  T Nürnberger; D Scheel
Journal:  Trends Plant Sci       Date:  2001-08       Impact factor: 18.313

3.  Characterization of NtCDPK1, a calcium-dependent protein kinase gene in Nicotiana tabacum, and the activity of its encoded protein.

Authors:  G M Yoon; H S Cho; H J Ha; J R Liu; H S Lee
Journal:  Plant Mol Biol       Date:  1999-03       Impact factor: 4.076

4.  Coordinated plant defense responses in Arabidopsis revealed by microarray analysis.

Authors:  P M Schenk; K Kazan; I Wilson; J P Anderson; T Richmond; S C Somerville; J M Manners
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

5.  Histone H3 transcript stability in alfalfa.

Authors:  T Kapros; A J Robertson; J H Waterborg
Journal:  Plant Mol Biol       Date:  1995-08       Impact factor: 4.076

6.  An increase in cytosolic calcium ion concentration precedes hypoosmotic shock-induced activation of protein kinases in tobacco suspension culture cells.

Authors:  K Takahashi; M Isobe; S Muto
Journal:  FEBS Lett       Date:  1997-01-20       Impact factor: 4.124

7.  Molecular cloning of two novel rice cDNA sequences encoding putative calcium-dependent protein kinases.

Authors:  D Breviario; L Morello; S Giani
Journal:  Plant Mol Biol       Date:  1995-03       Impact factor: 4.076

8.  Microarray analysis of chitin elicitation in Arabidopsis thaliana.

Authors:  Katrina M Ramonell; Bing Zhang; Rob M Ewing; Yu Chen; Dong Xu; Gary Stacey; Shauna Somerville
Journal:  Mol Plant Pathol       Date:  2002-09-01       Impact factor: 5.663

9.  Arabidopsis map kinase 4 negatively regulates systemic acquired resistance.

Authors:  M Petersen; P Brodersen; H Naested; E Andreasson; U Lindhart; B Johansen; H B Nielsen; M Lacy; M J Austin; J E Parker; S B Sharma; D F Klessig; R Martienssen; O Mattsson; A B Jensen; J Mundy
Journal:  Cell       Date:  2000-12-22       Impact factor: 41.582

10.  Two genes that encode Ca(2+)-dependent protein kinases are induced by drought and high-salt stresses in Arabidopsis thaliana.

Authors:  T Urao; T Katagiri; T Mizoguchi; K Yamaguchi-Shinozaki; N Hayashida; K Shinozaki
Journal:  Mol Gen Genet       Date:  1994-08-15
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  17 in total

1.  Analysis of differentially expressed transcripts of fungal elicitor- and wound-treated wild rice (Oryza grandiglumis).

Authors:  Kyung Mi Kim; Sung Ki Cho; Sang Hyun Shin; Gyung-Tae Kim; Jai Heon Lee; Boung-Jun Oh; Kyung Ho Kang; Jong Chan Hong; Jun Young Choi; Jeong Sheop Shin; Young Soo Chung
Journal:  J Plant Res       Date:  2005-09-01       Impact factor: 2.629

2.  Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor.

Authors:  Hanae Kaku; Yoko Nishizawa; Naoko Ishii-Minami; Chiharu Akimoto-Tomiyama; Naoshi Dohmae; Koji Takio; Eiichi Minami; Naoto Shibuya
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-07       Impact factor: 11.205

3.  Autophagy and Programmed Cell Death Are Critical Pathways in Jasmonic Acid Mediated Saline Stress Tolerance in Oryza sativa.

Authors:  Mohd Shahanbaj Khan; S Hemalatha
Journal:  Appl Biochem Biotechnol       Date:  2022-06-30       Impact factor: 3.094

Review 4.  Chitosan in plant protection.

Authors:  Abdelbasset El Hadrami; Lorne R Adam; Ismail El Hadrami; Fouad Daayf
Journal:  Mar Drugs       Date:  2010-03-30       Impact factor: 5.118

5.  Suppression of a phospholipase D gene, OsPLDbeta1, activates defense responses and increases disease resistance in rice.

Authors:  Takeshi Yamaguchi; Masaharu Kuroda; Hiromoto Yamakawa; Taketo Ashizawa; Kazuyuki Hirayae; Leona Kurimoto; Tomonori Shinya; Naoto Shibuya
Journal:  Plant Physiol       Date:  2009-03-13       Impact factor: 8.340

6.  Down-regulation of metallothionein, a reactive oxygen scavenger, by the small GTPase OsRac1 in rice.

Authors:  Hann Ling Wong; Tsuyoshi Sakamoto; Tsutomu Kawasaki; Kenji Umemura; Ko Shimamoto
Journal:  Plant Physiol       Date:  2004-06-25       Impact factor: 8.340

7.  CERK1, a LysM receptor kinase, is essential for chitin elicitor signaling in Arabidopsis.

Authors:  Ayako Miya; Premkumar Albert; Tomonori Shinya; Yoshitake Desaki; Kazuya Ichimura; Ken Shirasu; Yoshihiro Narusaka; Naoto Kawakami; Hanae Kaku; Naoto Shibuya
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-27       Impact factor: 11.205

8.  Expression analysis of calcium-dependent protein kinase gene family during reproductive development and abiotic stress conditions in rice (Oryza sativa L. ssp. indica).

Authors:  Swatismita Ray; Pinky Agarwal; Rita Arora; Sanjay Kapoor; Akhilesh K Tyagi
Journal:  Mol Genet Genomics       Date:  2007-07-18       Impact factor: 3.291

9.  Characterization of resistance to pine wood nematode infection in Pinus thunbergii using suppression subtractive hybridization.

Authors:  Tomonori Hirao; Eitaro Fukatsu; Atsushi Watanabe
Journal:  BMC Plant Biol       Date:  2012-01-24       Impact factor: 4.215

10.  Comparative transcriptome profiling of the early response to Magnaporthe oryzae in durable resistant vs susceptible rice (Oryza sativa L.) genotypes.

Authors:  Paolo Bagnaresi; Chiara Biselli; Luigi Orrù; Simona Urso; Laura Crispino; Pamela Abbruscato; Pietro Piffanelli; Elisabetta Lupotto; Luigi Cattivelli; Giampiero Valè
Journal:  PLoS One       Date:  2012-12-12       Impact factor: 3.240
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