Literature DB >> 12954080

Polyester synthases: natural catalysts for plastics.

Bernd H A Rehm1.   

Abstract

Polyhydroxyalkanoates (PHAs) are biopolyesters composed of hydroxy fatty acids, which represent a complex class of storage polyesters. They are synthesized by a wide range of different Gram-positive and Gram-negative bacteria, as well as by some Archaea, and are deposited as insoluble cytoplasmic inclusions. Polyester synthases are the key enzymes of polyester biosynthesis and catalyse the conversion of (R)-hydroxyacyl-CoA thioesters to polyesters with the concomitant release of CoA. These soluble enzymes turn into amphipathic enzymes upon covalent catalysis of polyester-chain formation. A self-assembly process is initiated resulting in the formation of insoluble cytoplasmic inclusions with a phospholipid monolayer and covalently attached polyester synthases at the surface. Surface-attached polyester synthases show a marked increase in enzyme activity. These polyester synthases have only recently been biochemically characterized. An overview of these recent findings is provided. At present, 59 polyester synthase structural genes from 45 different bacteria have been cloned and the nucleotide sequences have been obtained. The multiple alignment of the primary structures of these polyester synthases show an overall identity of 8-96% with only eight strictly conserved amino acid residues. Polyester synthases can been assigned to four classes based on their substrate specificity and subunit composition. The current knowledge on the organization of the polyester synthase genes, and other genes encoding proteins related to PHA metabolism, is compiled. In addition, the primary structures of the 59 PHA synthases are aligned and analysed with respect to highly conserved amino acids, and biochemical features of polyester synthases are described. The proposed catalytic mechanism based on similarities to alpha/beta-hydrolases and mutational analysis is discussed. Different threading algorithms suggest that polyester synthases belong to the alpha/beta-hydrolase superfamily, with a conserved cysteine residue as catalytic nucleophile. This review provides a survey of the known biochemical features of these unique enzymes and their proposed catalytic mechanism.

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Year:  2003        PMID: 12954080      PMCID: PMC1223765          DOI: 10.1042/BJ20031254

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  140 in total

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Journal:  Protein Sci       Date:  1996-05       Impact factor: 6.725

2.  The open conformation of a Pseudomonas lipase.

Authors:  J D Schrag; Y Li; M Cygler; D Lang; T Burgdorf; H J Hecht; R Schmid; D Schomburg; T J Rydel; J D Oliver; L C Strickland; C M Dunaway; S B Larson; J Day; A McPherson
Journal:  Structure       Date:  1997-02-15       Impact factor: 5.006

3.  Refined structure of dienelactone hydrolase at 1.8 A.

Authors:  D Pathak; D Ollis
Journal:  J Mol Biol       Date:  1990-07-20       Impact factor: 5.469

4.  Synthesis of poly(3-hydroxyalkanoates) in Escherichia coli expressing the PHA synthase gene phaC2 from Pseudomonas aeruginosa: comparison of PhaC1 and PhaC2.

Authors:  Q Qi; B H Rehm; A Steinbüchel
Journal:  FEMS Microbiol Lett       Date:  1997-12-01       Impact factor: 2.742

5.  Differential effects of temperature on E. coli and synthetic polyhydroxybutyrate/polyphosphate channels.

Authors:  S Das; D Seebach; R N Reusch
Journal:  Biochemistry       Date:  2002-04-23       Impact factor: 3.162

Review 6.  Recent advances in polyhydroxyalkanoate production by bacterial fermentation: mini-review.

Authors:  S Y Lee; J Choi; H H Wong
Journal:  Int J Biol Macromol       Date:  1999 Jun-Jul       Impact factor: 6.953

7.  Polymerase C1 levels and poly(R-3-hydroxyalkanoate) synthesis in wild-type and recombinant Pseudomonas strains.

Authors:  M N Kraak; T H Smits; B Kessler; B Witholt
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

8.  Formation of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) by PHA synthase from Ralstonia eutropha.

Authors:  D Dennis; M McCoy; A Stangl; H E Valentin; Z Wu
Journal:  J Biotechnol       Date:  1998-10-08       Impact factor: 3.307

9.  Identification of a new class of biopolymer: bacterial synthesis of a sulfur-containing polymer with thioester linkages.

Authors:  T Lütke-Eversloh; K Bergander; H Luftmann; A Steinbüchel
Journal:  Microbiology       Date:  2001-01       Impact factor: 2.777

10.  Cloning and molecular analysis of the Poly(3-hydroxybutyrate) and Poly(3-hydroxybutyrate-co-3-hydroxyalkanoate) biosynthesis genes in Pseudomonas sp. strain 61-3.

Authors:  H Matsusaki; S Manji; K Taguchi; M Kato; T Fukui; Y Doi
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

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  145 in total

1.  Mutations derived from the thermophilic polyhydroxyalkanoate synthase PhaC enhance the thermostability and activity of PhaC from Cupriavidus necator H16.

Authors:  Der-Shyan Sheu; Wen-Ming Chen; Yung-Wei Lai; Rey-Chang Chang
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

2.  Engineering bacteria to manufacture functionalized polyester beads.

Authors:  Jenny L Draper; Bernd H Rehm
Journal:  Bioengineered       Date:  2012-06-18       Impact factor: 3.269

3.  Roles of multiple acetoacetyl coenzyme A reductases in polyhydroxybutyrate biosynthesis in Ralstonia eutropha H16.

Authors:  Charles F Budde; Alison E Mahan; Jingnan Lu; Chokyun Rha; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

Review 4.  Polyhydroxyalkanoate and its efficient production: an eco-friendly approach towards development.

Authors:  Rutika Sehgal; Reena Gupta
Journal:  3 Biotech       Date:  2020-11-24       Impact factor: 2.406

5.  Biosynthesis of polyhydroxyalkanaotes by a novel facultatively anaerobic Vibrio sp. under marine conditions.

Authors:  Keiji Numata; Yoshiharu Doi
Journal:  Mar Biotechnol (NY)       Date:  2011-11-09       Impact factor: 3.619

6.  Molecular characterization of the phaECHm genes, required for biosynthesis of poly(3-hydroxybutyrate) in the extremely halophilic archaeon Haloarcula marismortui.

Authors:  Jing Han; Qiuhe Lu; Ligang Zhou; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2007-08-03       Impact factor: 4.792

Review 7.  Neutral lipid bodies in prokaryotes: recent insights into structure, formation, and relationship to eukaryotic lipid depots.

Authors:  Marc Wältermann; Alexander Steinbüchel
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

8.  Phasin proteins activate Aeromonas caviae polyhydroxyalkanoate (PHA) synthase but not Ralstonia eutropha PHA synthase.

Authors:  Kazunori Ushimaru; Yoko Motoda; Keiji Numata; Takeharu Tsuge
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

9.  PhaM is the physiological activator of poly(3-hydroxybutyrate) (PHB) synthase (PhaC1) in Ralstonia eutropha.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

10.  Characterization of site-specific mutations in a short-chain-length/medium-chain-length polyhydroxyalkanoate synthase: in vivo and in vitro studies of enzymatic activity and substrate specificity.

Authors:  Jo-Ann Chuah; Satoshi Tomizawa; Miwa Yamada; Takeharu Tsuge; Yoshiharu Doi; Kumar Sudesh; Keiji Numata
Journal:  Appl Environ Microbiol       Date:  2013-04-12       Impact factor: 4.792

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