Literature DB >> 12952526

The organization and evolution of the human Y chromosome.

Brian Charlesworth1.   

Abstract

The recent sequencing of a large chunk of euchromatin from the human Y chromosome is a technical tour de force. It answers some evolutionary questions about this unusual chromosome while raising others.

Entities:  

Mesh：

Year:  2003        PMID： 12952526      PMCID： PMC193647          DOI： 10.1186/gb-2003-4-9-226

Source DB:  PubMed          Journal:  Genome Biol        ISSN： 1474-7596            Impact factor:   13.583


  14 in total

Review 1.  The degeneration of Y chromosomes.

Authors:  B Charlesworth; D Charlesworth
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-11-29       Impact factor: 6.237

2.  Initial sequencing and analysis of the human genome.

Authors:  E S Lander; L M Linton; B Birren; C Nusbaum; M C Zody; J Baldwin; K Devon; K Dewar; M Doyle; W FitzHugh; R Funke; D Gage; K Harris; A Heaford; J Howland; L Kann; J Lehoczky; R LeVine; P McEwan; K McKernan; J Meldrim; J P Mesirov; C Miranda; W Morris; J Naylor; C Raymond; M Rosetti; R Santos; A Sheridan; C Sougnez; Y Stange-Thomann; N Stojanovic; A Subramanian; D Wyman; J Rogers; J Sulston; R Ainscough; S Beck; D Bentley; J Burton; C Clee; N Carter; A Coulson; R Deadman; P Deloukas; A Dunham; I Dunham; R Durbin; L French; D Grafham; S Gregory; T Hubbard; S Humphray; A Hunt; M Jones; C Lloyd; A McMurray; L Matthews; S Mercer; S Milne; J C Mullikin; A Mungall; R Plumb; M Ross; R Shownkeen; S Sims; R H Waterston; R K Wilson; L W Hillier; J D McPherson; M A Marra; E R Mardis; L A Fulton; A T Chinwalla; K H Pepin; W R Gish; S L Chissoe; M C Wendl; K D Delehaunty; T L Miner; A Delehaunty; J B Kramer; L L Cook; R S Fulton; D L Johnson; P J Minx; S W Clifton; T Hawkins; E Branscomb; P Predki; P Richardson; S Wenning; T Slezak; N Doggett; J F Cheng; A Olsen; S Lucas; C Elkin; E Uberbacher; M Frazier; R A Gibbs; D M Muzny; S E Scherer; J B Bouck; E J Sodergren; K C Worley; C M Rives; J H Gorrell; M L Metzker; S L Naylor; R S Kucherlapati; D L Nelson; G M Weinstock; Y Sakaki; A Fujiyama; M Hattori; T Yada; A Toyoda; T Itoh; C Kawagoe; H Watanabe; Y Totoki; T Taylor; J Weissenbach; R Heilig; W Saurin; F Artiguenave; P Brottier; T Bruls; E Pelletier; C Robert; P Wincker; D R Smith; L Doucette-Stamm; M Rubenfield; K Weinstock; H M Lee; J Dubois; A Rosenthal; M Platzer; G Nyakatura; S Taudien; A Rump; H Yang; J Yu; J Wang; G Huang; J Gu; L Hood; L Rowen; A Madan; S Qin; R W Davis; N A Federspiel; A P Abola; M J Proctor; R M Myers; J Schmutz; M Dickson; J Grimwood; D R Cox; M V Olson; R Kaul; C Raymond; N Shimizu; K Kawasaki; S Minoshima; G A Evans; M Athanasiou; R Schultz; B A Roe; F Chen; H Pan; J Ramser; H Lehrach; R Reinhardt; W R McCombie; M de la Bastide; N Dedhia; H Blöcker; K Hornischer; G Nordsiek; R Agarwala; L Aravind; J A Bailey; A Bateman; S Batzoglou; E Birney; P Bork; D G Brown; C B Burge; L Cerutti; H C Chen; D Church; M Clamp; R R Copley; T Doerks; S R Eddy; E E Eichler; T S Furey; J Galagan; J G Gilbert; C Harmon; Y Hayashizaki; D Haussler; H Hermjakob; K Hokamp; W Jang; L S Johnson; T A Jones; S Kasif; A Kaspryzk; S Kennedy; W J Kent; P Kitts; E V Koonin; I Korf; D Kulp; D Lancet; T M Lowe; A McLysaght; T Mikkelsen; J V Moran; N Mulder; V J Pollara; C P Ponting; G Schuler; J Schultz; G Slater; A F Smit; E Stupka; J Szustakowki; D Thierry-Mieg; J Thierry-Mieg; L Wagner; J Wallis; R Wheeler; A Williams; Y I Wolf; K H Wolfe; S P Yang; R F Yeh; F Collins; M S Guyer; J Peterson; A Felsenfeld; K A Wetterstrand; A Patrinos; M J Morgan; P de Jong; J J Catanese; K Osoegawa; H Shizuya; S Choi; Y J Chen; J Szustakowki
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

3.  Duplicative transfer of a MADS box gene to a plant Y chromosome.

Authors:  Sachihiro Matsunaga; Erika Isono; Eduard Kejnovsky; Boris Vyskot; Jaroslav Dolezel; Shigeyuki Kawano; Deborah Charlesworth
Journal:  Mol Biol Evol       Date:  2003-04-25       Impact factor: 16.240

4.  The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes.

Authors:  Helen Skaletsky; Tomoko Kuroda-Kawaguchi; Patrick J Minx; Holland S Cordum; LaDeana Hillier; Laura G Brown; Sjoerd Repping; Tatyana Pyntikova; Johar Ali; Tamberlyn Bieri; Asif Chinwalla; Andrew Delehaunty; Kim Delehaunty; Hui Du; Ginger Fewell; Lucinda Fulton; Robert Fulton; Tina Graves; Shun-Fang Hou; Philip Latrielle; Shawn Leonard; Elaine Mardis; Rachel Maupin; John McPherson; Tracie Miner; William Nash; Christine Nguyen; Philip Ozersky; Kymberlie Pepin; Susan Rock; Tracy Rohlfing; Kelsi Scott; Brian Schultz; Cindy Strong; Aye Tin-Wollam; Shiaw-Pyng Yang; Robert H Waterston; Richard K Wilson; Steve Rozen; David C Page
Journal:  Nature       Date:  2003-06-19       Impact factor: 49.962

5.  Abundant gene conversion between arms of palindromes in human and ape Y chromosomes.

Authors:  Steve Rozen; Helen Skaletsky; Janet D Marszalek; Patrick J Minx; Holland S Cordum; Robert H Waterston; Richard K Wilson; David C Page
Journal:  Nature       Date:  2003-06-19       Impact factor: 49.962

6.  Genetic Variability, Twin Hybrids and Constant Hybrids, in a Case of Balanced Lethal Factors.

Authors:  H J Muller
Journal:  Genetics       Date:  1918-09       Impact factor: 4.562

7.  Novel gene conversion between X-Y homologues located in the nonrecombining region of the Y chromosome in Felidae (Mammalia).

Authors:  J Pecon Slattery; L Sanner-Wachter; S J O'Brien
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

8.  Four evolutionary strata on the human X chromosome.

Authors:  B T Lahn; D C Page
Journal:  Science       Date:  1999-10-29       Impact factor: 47.728

9.  Conserved synteny between the chicken Z sex chromosome and human chromosome 9 includes the male regulatory gene DMRT1: a comparative (re)view on avian sex determination.

Authors:  I Nanda; E Zend-Ajusch; Z Shan; F Grützner; M Schartl; D W Burt; M Koehler; V M Fowler; G Goodwin; W J Schneider; S Mizuno; G Dechant; T Haaf; M Schmid
Journal:  Cytogenet Cell Genet       Date:  2000

Review 10.  The rise and fall of SRY.

Authors:  Jennifer A Marshall Graves
Journal:  Trends Genet       Date:  2002-05       Impact factor: 11.639
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  18 in total

1.  Insertional polymorphisms of endogenous feline leukemia viruses.

Authors:  Alfred L Roca; William G Nash; Joan C Menninger; William J Murphy; Stephen J O'Brien
Journal:  J Virol       Date:  2005-04       Impact factor: 5.103

2.  Feline Leukemia Virus (FeLV) Disease Outcomes in a Domestic Cat Breeding Colony: Relationship to Endogenous FeLV and Other Chronic Viral Infections.

Authors:  Jordan A Powers; Elliott S Chiu; Simona J Kraberger; Melody Roelke-Parker; Isabella Lowery; Katelyn Erbeck; Ryan Troyer; Scott Carver; Sue VandeWoude
Journal:  J Virol       Date:  2018-08-29       Impact factor: 5.103

3.  A large palindrome with interchromosomal gene duplications in the pericentromeric region of the D. melanogaster Y chromosome.

Authors:  María Méndez-Lago; Casey M Bergman; Beatriz de Pablos; Alan Tracey; Siobhan L Whitehead; Alfredo Villasante
Journal:  Mol Biol Evol       Date:  2011-02-05       Impact factor: 16.240

4.  Gene duplication, gene conversion and the evolution of the Y chromosome.

Authors:  Tim Connallon; Andrew G Clark
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

Review 5.  Consequences of Y chromosome microdeletions beyond male infertility.

Authors:  Stacy Colaco; Deepak Modi
Journal:  J Assist Reprod Genet       Date:  2019-06-18       Impact factor: 3.412

6.  A detailed physical map of the horse Y chromosome.

Authors:  Terje Raudsepp; Avni Santani; Barbara Wallner; Srinivas R Kata; Chengwei Ren; Hong-Bin Zhang; James E Womack; Loren C Skow; Bhanu P Chowdhary
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-14       Impact factor: 11.205

7.  Ancestral Y-linked genes were maintained by translocation to the X and Y chromosomes fused to an autosomal pair in the Okinawa spiny rat Tokudaia muenninki.

Authors:  Chie Murata; Yoko Kuroki; Issei Imoto; Asato Kuroiwa
Journal:  Chromosome Res       Date:  2016-06-22       Impact factor: 5.239

8.  New insights into the evolution of human Y chromosome palindromes through mutation and gene conversion.

Authors:  Maria Bonito; Eugenia D'Atanasio; Francesco Ravasini; Selene Cariati; Andrea Finocchio; Andrea Novelletto; Beniamino Trombetta; Fulvio Cruciani
Journal:  Hum Mol Genet       Date:  2021-11-16       Impact factor: 6.150

9.  Can intra-Y gene conversion oppose the degeneration of the human Y chromosome? A simulation study.

Authors:  Gabriel A B Marais; Paulo R A Campos; Isabel Gordo
Journal:  Genome Biol Evol       Date:  2010-07-12       Impact factor: 3.416

10.  Gene genealogies indicates abundant gene conversions and independent evolutionary histories of the mating-type chromosomes in the evolutionary history of Neurospora tetrasperma.

Authors:  Audrius Menkis; Carrie A Whittle; Hanna Johannesson
Journal:  BMC Evol Biol       Date:  2010-07-31       Impact factor: 3.260
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