Literature DB >> 12948513

Gene expression and EST analyses of Ustilago maydis germinating teliospores.

Nuno T Sacadura1, Barry J Saville.   

Abstract

Ustilago maydis grows in its host Zea mays eliciting the formation of obvious tumors that are full of black teliospores. Teliospores are thick-walled, dormant, diploid cells that have evolved for dispersal and survival of the pathogen. Their germination leads to new rounds of infection and is temporally linked to meiosis. We are investigating gene expression during teliospore germination to gain insight into the control of this process. Here we identify genes expressed through creation of an expressed sequence tag (EST) library. We generated 2871 ESTs that are assembled into 1293 contiguous sequences. Based upon a blast search similarity cutoff of E < or =10(-5) 38% of all contigs were orphans while 62% showed similarity to sequences in the protein database. Analyses of blast searches were used to functionally classify genes. Northern hybridizations using specific cDNA clones reveal a relative level of expression consistent with the number of sequences per contig. Identified genes and expression information provide a base for genome annotation of U. maydis and further investigation of teliospore germination and pathogenesis.

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Year:  2003        PMID: 12948513     DOI: 10.1016/s1087-1845(03)00078-1

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  15 in total

1.  Ustilago maydis transcript features identified through full-length cDNA analysis.

Authors:  Colleen E Doyle; Michael E Donaldson; Erin N Morrison; Barry J Saville
Journal:  Mol Genet Genomics       Date:  2011-07-13       Impact factor: 3.291

2.  Investigating Teliospore Germination Using Microrespiration Analysis and Microdissection.

Authors:  Lauren A Ostrowski; Amanda M Seto; Barry Saville
Journal:  J Vis Exp       Date:  2018-05-13       Impact factor: 1.355

3.  Differential gene expression during teliospore germination in Ustilago maydis.

Authors:  Ali R Zahiri; Mohan R Babu; Barry J Saville
Journal:  Mol Genet Genomics       Date:  2005-05-11       Impact factor: 3.291

4.  Serial analysis of gene expression reveals conserved links between protein kinase A, ribosome biogenesis, and phosphate metabolism in Ustilago maydis.

Authors:  Luis M Larraya; Kylie J Boyce; Austin So; Barbara R Steen; Steven Jones; Marco Marra; James W Kronstad
Journal:  Eukaryot Cell       Date:  2005-12

5.  Differential gene expression in filamentous cells of Ustilago maydis.

Authors:  Mohan R Babu; Kristen Choffe; Barry J Saville
Journal:  Curr Genet       Date:  2005-04-05       Impact factor: 3.886

6.  Generation and analysis of expressed sequence tags from a cDNA library of the fruiting body of Ganoderma lucidum.

Authors:  Hongmei Luo; Chao Sun; Jingyuan Song; Jin Lan; Ying Li; Xiwen Li; Shilin Chen
Journal:  Chin Med       Date:  2010-03-16       Impact factor: 5.455

7.  A comparative genomic analysis of ESTs from Ustilago maydis.

Authors:  Ryan Austin; Nicholas J Provart; Nuno T Sacadura; Kimberly G Nugent; Mohan Babu; Barry J Saville
Journal:  Funct Integr Genomics       Date:  2004-09-03       Impact factor: 3.410

8.  Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi.

Authors:  Junhuan Xu; Rob Linning; John Fellers; Matthew Dickinson; Wenhan Zhu; Ivan Antonov; David L Joly; Michael E Donaldson; Tamar Eilam; Yehoshua Anikster; Travis Banks; Sarah Munro; Michael Mayo; Brian Wynhoven; Johar Ali; Richard Moore; Brent McCallum; Mark Borodovsky; Barry Saville; Guus Bakkeren
Journal:  BMC Genomics       Date:  2011-03-24       Impact factor: 3.969

9.  Analysis of the dermatophyte Trichophyton rubrum expressed sequence tags.

Authors:  Lingling Wang; Li Ma; Wenchuan Leng; Tao Liu; Lu Yu; Jian Yang; Li Yang; Wenliang Zhang; Qian Zhang; Jie Dong; Ying Xue; Yafang Zhu; Xingye Xu; Zhe Wan; Guohui Ding; Fudong Yu; Kang Tu; Yixue Li; Ruoyu Li; Yan Shen; Qi Jin
Journal:  BMC Genomics       Date:  2006-10-11       Impact factor: 3.969

10.  Identification and characterization of secreted and pathogenesis-related proteins in Ustilago maydis.

Authors:  Olaf Müller; Peter H Schreier; Joachim F Uhrig
Journal:  Mol Genet Genomics       Date:  2007-10-05       Impact factor: 3.291

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