Literature DB >> 12945014

A genomewide scan for age-related macular degeneration provides evidence for linkage to several chromosomal regions.

Johanna M Seddon1, Susan L Santangelo, Kathryn Book, Sandy Chong, Jennifer Cote.   

Abstract

We report the results of a genomewide scan for age-related macular degeneration (AMD) in 158 multiplex families. AMD classification was based on fundus photography and was assigned a grade ranging from 1 (no disease) to 5 (exudative disease). Genotyping was performed by the National Heart, Lung, and Blood Institute Mammalian Genotyping Service at Marshfield (404 short tandem repeat markers). The sample included 158 families with two or more siblings with AMD, 490 affected individuals, 101 unaffected individuals, and 38 whose affection status was unknown. Relative pairs included 511 affected sibling, 28 avuncular, 53 cousin, 7 grandparent-grandchild, and 9 grand-avuncular pairs. Two-point parametric and multipoint parametric and nonparametric analyses were performed. Maximum two-point LOD scores of 1.0-2.0 were found for markers on chromosomes 1, 2, 8, 10, 14, 15, and 22. Multipoint analyses were consistent with the two-point results for chromosomes 1, 2, 8, 10, and 22 and provided evidence for additional linkage regions on chromosomes 3, 6, 8, 12, 16, and X. Our signals on chromosomes 1q, 6p, and 10q are consistent with some other previously published results. Significant linkage to AMD was found for one marker on chromosome 2, two adjacent markers on chromosome 3, two adjacent markers on chromosome 6, and seven contiguous markers on chromosome 8, with empirical P values of .00001. The consistency of many of the other signals across both two-point and multipoint, as well as parametric and nonparametric, analyses indicate several other regions worthy of follow-up.

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Year:  2003        PMID: 12945014      PMCID: PMC1180601          DOI: 10.1086/378505

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  63 in total

1.  Age-related maculopathy: an expanded genome-wide scan with evidence of susceptibility loci within the 1q31 and 17q25 regions.

Authors:  D E Weeks; Y P Conley; H J Tsai; T S Mah; P J Rosenfeld; T O Paul; A W Eller; L S Morse; J P Dailey; R E Ferrell; M B Gorin
Journal:  Am J Ophthalmol       Date:  2001-11       Impact factor: 5.258

2.  CORD9 a new locus for arCRD: mapping to 8p11, estimation of frequency, evaluation of a candidate gene.

Authors:  M Danciger; J Hendrickson; J Lyon; C Toomes; J C McHale; G A Fishman; C F Inglehearn; S G Jacobson; D B Farber
Journal:  Invest Ophthalmol Vis Sci       Date:  2001-10       Impact factor: 4.799

3.  A hemodynamic model of the pathogenesis of age-related macular degeneration.

Authors:  E Friedman
Journal:  Am J Ophthalmol       Date:  1997-11       Impact factor: 5.258

4.  Assessment of mutations in the Best macular dystrophy (VMD2) gene in patients with adult-onset foveomacular vitelliform dystrophy, age-related maculopathy, and bull's-eye maculopathy.

Authors:  J M Seddon; M A Afshari; S Sharma; P S Bernstein; S Chong; A Hutchinson; K Petrukhin; R Allikmets
Journal:  Ophthalmology       Date:  2001-11       Impact factor: 12.079

5.  Risk of incident age-related eye diseases in people with an affected sibling : The Beaver Dam Eye Study.

Authors:  B E Klein; R Klein; K E Lee; E L Moore; L Danforth
Journal:  Am J Epidemiol       Date:  2001-08-01       Impact factor: 4.897

6.  Paraoxonase gene polymorphisms and plasma oxidized low-density lipoprotein level as possible risk factors for exudative age-related macular degeneration.

Authors:  T Ikeda; H Obayashi; G Hasegawa; N Nakamura; T Yoshikawa; Y Imamura; K Koizumi; S Kinoshita
Journal:  Am J Ophthalmol       Date:  2001-08       Impact factor: 5.258

7.  A randomized, placebo-controlled, clinical trial of high-dose supplementation with vitamins C and E, beta carotene, and zinc for age-related macular degeneration and vision loss: AREDS report no. 8.

Authors: 
Journal:  Arch Ophthalmol       Date:  2001-10

8.  Dietary fat and risk for advanced age-related macular degeneration.

Authors:  J M Seddon; B Rosner; R D Sperduto; L Yannuzzi; J A Haller; N P Blair; W Willett
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9.  Genetic association of manganese superoxide dismutase with exudative age-related macular degeneration.

Authors:  K Kimura; Y Isashiki; S Sonoda; T Kakiuchi-Matsumoto; N Ohba
Journal:  Am J Ophthalmol       Date:  2000-12       Impact factor: 5.258

10.  The Age-Related Eye Disease Study system for classifying age-related macular degeneration from stereoscopic color fundus photographs: the Age-Related Eye Disease Study Report Number 6.

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Journal:  Am J Ophthalmol       Date:  2001-11       Impact factor: 5.258

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  76 in total

1.  Age-related maculopathy: a genomewide scan with continued evidence of susceptibility loci within the 1q31, 10q26, and 17q25 regions.

Authors:  Daniel E Weeks; Yvette P Conley; Hui-Ju Tsai; Tammy S Mah; Silke Schmidt; Eric A Postel; Anita Agarwal; Jonathan L Haines; Margaret A Pericak-Vance; Philip J Rosenfeld; T Otis Paul; Andrew W Eller; Lawrence S Morse; J P Dailey; Robert E Ferrell; Michael B Gorin
Journal:  Am J Hum Genet       Date:  2004-05-27       Impact factor: 11.025

Review 2.  Genetic factors of age-related macular degeneration.

Authors:  Jingsheng Tuo; Christine M Bojanowski; Chi-Chao Chan
Journal:  Prog Retin Eye Res       Date:  2004-03       Impact factor: 21.198

3.  Age-related macular degeneration: a high-resolution genome scan for susceptibility loci in a population enriched for late-stage disease.

Authors:  Gonçalo R Abecasis; Beverly M Yashar; Yu Zhao; Noor M Ghiasvand; Sepideh Zareparsi; Kari E H Branham; Adam C Reddick; Edward H Trager; Shigeo Yoshida; John Bahling; Elena Filippova; Susan Elner; Mark W Johnson; Andrew K Vine; Paul A Sieving; Samuel G Jacobson; Julia E Richards; Anand Swaroop
Journal:  Am J Hum Genet       Date:  2004-02-16       Impact factor: 11.025

Review 4.  Complement dysregulation in AMD: RPE-Bruch's membrane-choroid.

Authors:  Janet R Sparrow; Keiko Ueda; Jilin Zhou
Journal:  Mol Aspects Med       Date:  2012-04-05

Review 5.  Vitamin D: Implications for ocular disease and therapeutic potential.

Authors:  Rose Y Reins; Alison M McDermott
Journal:  Exp Eye Res       Date:  2015-02-25       Impact factor: 3.467

Review 6.  LOC387715/HTRA1 gene polymorphisms and susceptibility to age-related macular degeneration: A HuGE review and meta-analysis.

Authors:  Yu Tong; Jing Liao; Yuan Zhang; Jing Zhou; Hengyu Zhang; Meng Mao
Journal:  Mol Vis       Date:  2010-10-05       Impact factor: 2.367

7.  Genetics. Was the Human Genome Project worth the effort?

Authors:  Stephen P Daiger
Journal:  Science       Date:  2005-03-15       Impact factor: 47.728

8.  Complement factor H polymorphism in age-related macular degeneration.

Authors:  Robert J Klein; Caroline Zeiss; Emily Y Chew; Jen-Yue Tsai; Richard S Sackler; Chad Haynes; Alice K Henning; John Paul SanGiovanni; Shrikant M Mane; Susan T Mayne; Michael B Bracken; Frederick L Ferris; Jurg Ott; Colin Barnstable; Josephine Hoh
Journal:  Science       Date:  2005-03-10       Impact factor: 47.728

9.  Strong association of the Y402H variant in complement factor H at 1q32 with susceptibility to age-related macular degeneration.

Authors:  Sepideh Zareparsi; Kari E H Branham; Mingyao Li; Sapna Shah; Robert J Klein; Jurg Ott; Josephine Hoh; Gonçalo R Abecasis; Anand Swaroop
Journal:  Am J Hum Genet       Date:  2005-05-13       Impact factor: 11.025

10.  Risk alleles in CFH and ARMS2 and the long-term natural history of age-related macular degeneration: the Beaver Dam Eye Study.

Authors:  Ronald Klein; Chelsea E Myers; Stacy M Meuer; Ronald E Gangnon; Theru A Sivakumaran; Sudha K Iyengar; Kristine E Lee; Barbara E K Klein
Journal:  JAMA Ophthalmol       Date:  2013-03       Impact factor: 7.389

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