Literature DB >> 12942073

DNA molecules and configurations in a solid-state nanopore microscope.

Jiali Li1, Marc Gershow, Derek Stein, Eric Brandin, J A Golovchenko.   

Abstract

A nanometre-scale pore in a solid-state membrane provides a new way of electronically probing the structure of single linear polymers, including those of biological interest in their native environments. Previous work with biological protein pores wide enough to let through and sense single-stranded DNA molecules demonstrates the power of using nanopores, but many future tasks and applications call for a robust solid-state pore whose nanometre-scale dimensions and properties may be selected, as one selects the lenses of a microscope. Here we demonstrate a solid-state nanopore microscope capable of observing individual molecules of double-stranded DNA and their folding behaviour. We discuss extensions of the nanopore microscope concept to alternative probing mechanisms and applications, including the study of molecular structure and sequencing.

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Year:  2003        PMID: 12942073     DOI: 10.1038/nmat965

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  162 in total

1.  Stacked graphene-Al2O3 nanopore sensors for sensitive detection of DNA and DNA-protein complexes.

Authors:  Bala Murali Venkatesan; David Estrada; Shouvik Banerjee; Xiaozhong Jin; Vincent E Dorgan; Myung-Ho Bae; Narayana R Aluru; Eric Pop; Rashid Bashir
Journal:  ACS Nano       Date:  2011-12-23       Impact factor: 15.881

2.  Nucleic acid transport through carbon nanotube membranes.

Authors:  In-Chul Yeh; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-09       Impact factor: 11.205

3.  Sizing DNA using a nanometer-diameter pore.

Authors:  Jiunn B Heng; Chuen Ho; Taekyung Kim; Rolf Timp; Aleksij Aksimentiev; Yelena V Grinkova; Stephen Sligar; Klaus Schulten; Gregory Timp
Journal:  Biophys J       Date:  2004-08-23       Impact factor: 4.033

4.  Microscopic Kinetics of DNA Translocation through synthetic nanopores.

Authors:  Aleksij Aksimentiev; Jiunn B Heng; Gregory Timp; Klaus Schulten
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

5.  Focused ion beam induced deflections of freestanding thin films.

Authors:  Y-R Kim; P Chen; M J Aziz; D Branton; J J Vlassak
Journal:  J Appl Phys       Date:  2006-11-15       Impact factor: 2.546

6.  Characterizing and controlling the motion of ssDNA in a solid-state nanopore.

Authors:  Binquan Luan; Glenn Martyna; Gustavo Stolovitzky
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

7.  Resistive pulse sensing of magnetic beads and supraparticle structures using tunable pores.

Authors:  Geoff R Willmott; Mark Platt; Gil U Lee
Journal:  Biomicrofluidics       Date:  2012-01-12       Impact factor: 2.800

8.  Single molecule transcription profiling with AFM.

Authors:  Jason Reed; Bud Mishra; Bede Pittenger; Sergei Magonov; Joshua Troke; Michael A Teitell; James K Gimzewski
Journal:  Nanotechnology       Date:  2007-05-09       Impact factor: 3.874

9.  DNA translocation through an array of kinked nanopores.

Authors:  Zhu Chen; Yingbing Jiang; Darren R Dunphy; David P Adams; Carter Hodges; Nanguo Liu; Nan Zhang; George Xomeritakis; Xiaozhong Jin; N R Aluru; Steven J Gaik; Hugh W Hillhouse; C Jeffrey Brinker
Journal:  Nat Mater       Date:  2010-08       Impact factor: 43.841

Review 10.  The role of molecular modeling in bionanotechnology.

Authors:  Deyu Lu; Aleksei Aksimentiev; Amy Y Shih; Eduardo Cruz-Chu; Peter L Freddolino; Anton Arkhipov; Klaus Schulten
Journal:  Phys Biol       Date:  2006-02-02       Impact factor: 2.583

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