Literature DB >> 12930890

Hierarchical model of gene regulation by transforming growth factor beta.

Yaw-Ching Yang1, Ester Piek, Jiri Zavadil, Dan Liang, Donglu Xie, Joerg Heyer, Paul Pavlidis, Raju Kucherlapati, Anita B Roberts, Erwin P Böttinger.   

Abstract

Transforming growth factor betas (TGF-betas) regulate key aspects of embryonic development and major human diseases. Although Smad2, Smad3, and extracellular signal-regulated kinase (ERK) mitogen-activated protein kinases (MAPKs) have been proposed as key mediators in TGF-beta signaling, their functional specificities and interactivity in controlling transcriptional programs in different cell types and (patho)physiological contexts are not known. We investigated expression profiles of genes controlled by TGF-beta in fibroblasts with ablations of Smad2, Smad3, and ERK MAPK. Our results suggest that Smad3 is the essential mediator of TGF-beta signaling and directly activates genes encoding regulators of transcription and signal transducers through Smad3/Smad4 DNA-binding motif repeats that are characteristic for immediate-early target genes of TGF-beta but absent in intermediate target genes. In contrast, Smad2 and ERK predominantly transmodulated regulation of both immediate-early and intermediate genes by TGF-beta/Smad3. These results suggest a previously uncharacterized hierarchical model of gene regulation by TGF-beta in which TGF-beta causes direct activation by Smad3 of cascades of regulators of transcription and signaling that are transmodulated by Smad2 and/or ERK.

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Year:  2003        PMID: 12930890      PMCID: PMC193550          DOI: 10.1073/pnas.1834070100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  TRANSFAC: an integrated system for gene expression regulation.

Authors:  E Wingender; X Chen; R Hehl; H Karas; I Liebich; V Matys; T Meinhardt; M Prüss; I Reuter; F Schacherer
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Multiple modes of repression by the Smad transcriptional corepressor TGIF.

Authors:  D Wotton; R S Lo; L A Swaby; J Massagué
Journal:  J Biol Chem       Date:  1999-12-24       Impact factor: 5.157

3.  A mechanism of repression of TGFbeta/ Smad signaling by oncogenic Ras.

Authors:  M Kretzschmar; J Doody; I Timokhina; J Massagué
Journal:  Genes Dev       Date:  1999-04-01       Impact factor: 11.361

Review 4.  How cells read TGF-beta signals.

Authors:  J Massagué
Journal:  Nat Rev Mol Cell Biol       Date:  2000-12       Impact factor: 94.444

5.  Regulation of Smad7 promoter by direct association with Smad3 and Smad4.

Authors:  R P Nagarajan; J Zhang; W Li; Y Chen
Journal:  J Biol Chem       Date:  1999-11-19       Impact factor: 5.157

6.  Raf induces TGFbeta production while blocking its apoptotic but not invasive responses: a mechanism leading to increased malignancy in epithelial cells.

Authors:  K Lehmann; E Janda; C E Pierreux; M Rytömaa; A Schulze; M McMahon; C S Hill; H Beug; J Downward
Journal:  Genes Dev       Date:  2000-10-15       Impact factor: 11.361

7.  Efficient TGF-beta induction of the Smad7 gene requires cooperation between AP-1, Sp1, and Smad proteins on the mouse Smad7 promoter.

Authors:  G Brodin; A Ahgren; P ten Dijke; C H Heldin; R Heuchel
Journal:  J Biol Chem       Date:  2000-09-15       Impact factor: 5.157

8.  Smad3 and Smad4 mediate transcriptional activation of the human Smad7 promoter by transforming growth factor beta.

Authors:  G von Gersdorff; K Susztak; F Rezvani; M Bitzer; D Liang; E P Böttinger
Journal:  J Biol Chem       Date:  2000-04-14       Impact factor: 5.157

9.  TGF-(beta) type I receptor/ALK-5 and Smad proteins mediate epithelial to mesenchymal transdifferentiation in NMuMG breast epithelial cells.

Authors:  E Piek; A Moustakas; A Kurisaki; C H Heldin; P ten Dijke
Journal:  J Cell Sci       Date:  1999-12       Impact factor: 5.285

10.  Principal components analysis to summarize microarray experiments: application to sporulation time series.

Authors:  S Raychaudhuri; J M Stuart; R B Altman
Journal:  Pac Symp Biocomput       Date:  2000
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  84 in total

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Authors:  Tudorita Tumbar; Geraldine Guasch; Valentina Greco; Cedric Blanpain; William E Lowry; Michael Rendl; Elaine Fuchs
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

2.  RLP, a novel Ras-like protein, is an immediate-early transforming growth factor-beta (TGF-beta) target gene that negatively regulates transcriptional activity induced by TGF-beta.

Authors:  Ester Piek; Maarten Van Dinther; W Tony Parks; John M Sallee; Erwin P Böttinger; Anita B Roberts; Peter Ten Dijke
Journal:  Biochem J       Date:  2004-10-01       Impact factor: 3.857

Review 3.  Progranulin: a growth factor, a novel TNFR ligand and a drug target.

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Journal:  Pharmacol Ther       Date:  2011-10-08       Impact factor: 12.310

4.  Pancreatic cancer cells respond to type I collagen by inducing snail expression to promote membrane type 1 matrix metalloproteinase-dependent collagen invasion.

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Journal:  J Biol Chem       Date:  2011-02-02       Impact factor: 5.157

5.  Redundant roles of SMAD2 and SMAD3 in ovarian granulosa cells in vivo.

Authors:  Qinglei Li; Stephanie A Pangas; Carolina J Jorgez; Jonathan M Graff; Michael Weinstein; Martin M Matzuk
Journal:  Mol Cell Biol       Date:  2008-09-22       Impact factor: 4.272

6.  Granulin epithelin precursor: a bone morphogenic protein 2-inducible growth factor that activates Erk1/2 signaling and JunB transcription factor in chondrogenesis.

Authors:  Jian Q Feng; Feng-Jin Guo; Bai-Chun Jiang; Yan Zhang; Sally Frenkel; Da-Wei Wang; Wei Tang; Yixia Xie; Chuan-Ju Liu
Journal:  FASEB J       Date:  2010-02-02       Impact factor: 5.191

7.  Regulation of Epithelial-Mesenchymal Transition by Transmission of Mechanical Stress through Epithelial Tissues.

Authors:  Nikolce Gjorevski; Eline Boghaert; Celeste M Nelson
Journal:  Cancer Microenviron       Date:  2011-07-12

8.  Developmentally regulated SMAD2 and SMAD3 utilization directs activin signaling outcomes.

Authors:  Catherine Itman; Chris Small; Michael Griswold; Ankur K Nagaraja; Martin M Matzuk; Chester W Brown; David A Jans; Kate L Loveland
Journal:  Dev Dyn       Date:  2009-07       Impact factor: 3.780

9.  Hepatocyte growth factor inhibits epithelial to myofibroblast transition in lung cells via Smad7.

Authors:  Manasi N Shukla; Jane L Rose; Rabindranath Ray; Kira L Lathrop; Anuradha Ray; Prabir Ray
Journal:  Am J Respir Cell Mol Biol       Date:  2008-11-06       Impact factor: 6.914

10.  Integration of TGF-beta/Smad and Jagged1/Notch signalling in epithelial-to-mesenchymal transition.

Authors:  Jiri Zavadil; Lukas Cermak; Noemi Soto-Nieves; Erwin P Böttinger
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

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