Literature DB >> 12930749

Identification of trans-dominant modifiers of Prat expression in Drosophila melanogaster.

Nicolas Malmanche1, Denise V Clark.   

Abstract

The first committed step in the purine de novo synthesis pathway is performed by amidophosphoribosyltransferase (EC 2.4.2.14) or Prat. Drosophila melanogaster Prat is an essential gene with a promoter that lacks a TATA-box and initiator element and has multiple transcription start sites with a predominant start site. To study the regulation of Prat expression in the adult eye, we used the Prat:bw reporter gene, in which the Prat coding region was replaced with the brown (bw) coding region. The pale-orange eye color of a single copy of Prat:bw prompted us to use a multicopy array of Prat:bw that was derived using P transposase mutagenesis and produces a darker-orange eye color in a bw(D); st genetic background. We used a 13-copy array of Prat:bw as a tool to recover dominant EMS-induced mutations that affect the expression of the transgene. After screening 21,000 F(1)s for deviation from the orange eye color, we isolated 23 dominant modifiers: 21 suppressors (1 Y-linked, 5 X-linked, 4 2-linked, and 11 3-linked) and 2 enhancers (1 2-linked and 1 3-linked). Quantification of their effect on endogenous Prat gene expression, using RT-PCR in young adult fly heads, identifies a subset of modifiers that are candidates for genes involved in regulating Prat expression.

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Year:  2003        PMID: 12930749      PMCID: PMC1462663     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  28 in total

1.  Genetic modification of heterochromatic association and nuclear organization in Drosophila.

Authors:  A K Csink; S Henikoff
Journal:  Nature       Date:  1996-06-06       Impact factor: 49.962

2.  Interactions among dosage-dependent trans-acting modifiers of gene expression and position-effect variegation in Drosophila.

Authors:  U Bhadra; M P Bhadra; J A Birchler
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

3.  Repetitive arrays containing a housekeeping gene have altered polytene chromosome morphology in Drosophila.

Authors:  D V Clark; J F Sabl; S Henikoff
Journal:  Chromosoma       Date:  1998-05       Impact factor: 4.316

4.  A sex-influenced modifier in Drosophila that affects a broad spectrum of target loci including the histone repeats.

Authors:  U Bhadra; M Pal-Bhadra; J A Birchler
Journal:  Genetics       Date:  1997-07       Impact factor: 4.562

5.  Gene within a gene: nested Drosophila genes encode unrelated proteins on opposite DNA strands.

Authors:  S Henikoff; M A Keene; K Fechtel; J W Fristrom
Journal:  Cell       Date:  1986-01-17       Impact factor: 41.582

6.  Multiple purine pathway enzyme activities are encoded at a single genetic locus in Drosophila.

Authors:  S Henikoff; M A Keene; J S Sloan; J Bleskan; R Hards; D Patterson
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

7.  Amidophosphoribosyltransferase limits the rate of cell growth-linked de novo purine biosynthesis in the presence of constant capacity of salvage purine biosynthesis.

Authors:  T Yamaoka; M Kondo; S Honda; H Iwahana; M Moritani; S Ii; K Yoshimoto; M Itakura
Journal:  J Biol Chem       Date:  1997-07-11       Impact factor: 5.157

8.  The purine biosynthesis enzyme PRAT detected in proenzyme and mature forms during development of Drosophila melanogaster.

Authors:  D V Clark; N MacAfee
Journal:  Insect Biochem Mol Biol       Date:  2000-04       Impact factor: 4.714

Review 9.  Heterochromatin and gene expression in Drosophila.

Authors:  K S Weiler; B T Wakimoto
Journal:  Annu Rev Genet       Date:  1995       Impact factor: 16.830

10.  The PRAT purine synthesis gene duplication in Drosophila melanogaster and Drosophila virilis is associated with a retrotransposition event and diversification of expression patterns.

Authors:  Nicolas Malmanche; Dennis Drapeau; Patrick Cafferty; Yingbiao Ji; Denise V Clark
Journal:  J Mol Evol       Date:  2003-05       Impact factor: 2.395

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  1 in total

1.  The purine synthesis gene Prat2 is required for Drosophila metamorphosis, as revealed by inverted-repeat-mediated RNA interference.

Authors:  Yingbiao Ji; Denise V Clark
Journal:  Genetics       Date:  2005-12-01       Impact factor: 4.562

  1 in total

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