Literature DB >> 12927024

Expression of GAL genes in a mutant strain of Saccharomyces cerevisiae lacking GAL80: quantitative model and experimental verification.

Malkhey Verma1, Paike Jayadeva Bhat, K V Venkatesh.   

Abstract

The regulatory network of GAL genes is a model system for the production of foreign proteins. A mathematical model based on steady state was developed for the expression of GAL (galactosidase) genes in a mutant strain of Saccharomyces cerevisiae lacking GAL80. The transcriptional and translational responses of the GAL switch were predicted at various steady-state glucose concentrations. The model predicted ultrasensitive transcriptional response with a Hill coefficient ( h ) of 1.9 and 3.2 for genes with one and two binding sites respectively. Further, a lesser degree of ultrasensitivity was predicted for translational response with an h value of 1.3 for genes with one binding site and 2.1 for genes with two binding sites. The ultrasensitivity was due to dimerization of regulatory protein Gal4p and co-operative binding of Gal4p to DNA. The steady-state predictions were experimentally verified through measurements of alpha-galactosidase (for one binding site) and beta-galactosidase (for two binding sites). The steady state model was further extended to represent the dynamic expression profile and the same was verified experimentally. The growth phase and the synthesis of foreign protein could be distinctly separated using a mutant strain of Saccharomyces cerevisiae (baker's yeast).

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Year:  2004        PMID: 12927024     DOI: 10.1042/BA20030119

Source DB:  PubMed          Journal:  Biotechnol Appl Biochem        ISSN: 0885-4513            Impact factor:   2.431


  4 in total

1.  Steady-state analysis of glucose repression reveals hierarchical expression of proteins under Mig1p control in Saccharomyces cerevisiae.

Authors:  Malkhey Verma; Paike J Bhat; K V Venkatesh
Journal:  Biochem J       Date:  2005-06-15       Impact factor: 3.857

2.  Application of structure equation modeling for inferring a serial transcriptional regulation in yeast.

Authors:  Sachiyo Aburatani
Journal:  Gene Regul Syst Bio       Date:  2011-11-10

3.  Stochastic analysis of the GAL genetic switch in Saccharomyces cerevisiae: modeling and experiments reveal hierarchy in glucose repression.

Authors:  Vinay Prasad; K V Venkatesh
Journal:  BMC Syst Biol       Date:  2008-11-17

4.  Dual regulation of cytoplasmic and mitochondrial acetyl-CoA utilization for improved isoprene production in Saccharomyces cerevisiae.

Authors:  Xiaomei Lv; Fan Wang; Pingping Zhou; Lidan Ye; Wenping Xie; Haoming Xu; Hongwei Yu
Journal:  Nat Commun       Date:  2016-09-21       Impact factor: 14.919

  4 in total

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