Literature DB >> 12920109

TetraploidMap: construction of a linkage map in autotetraploid species.

C A Hackett1, Z W Luo.   

Abstract

TetraploidMap is a suite of Fortran 90 routines run from Microsoft Windows with a text-based input and output. TetraploidMap enables the user to assemble a linkage map from dominant and codominant (multiallelic) marker loci scored for the parents and full-sib progeny of a cross in an autotetraploid species. It includes routines for the inference of the parental genotypes, identification of linkage groups, two-point analysis to estimate the recombination frequency and LOD score between all pairs of marker in a linkage group, and locus ordering by simulated annealing.

Mesh：

Year:  2003        PMID： 12920109     DOI： 10.1093/jhered/esg066

Source DB:  PubMed          Journal:  J Hered        ISSN： 0022-1503            Impact factor:   2.645


  31 in total

1.  Association of a CONSTANS-LIKE gene to flowering and height in autotetraploid alfalfa.

Authors:  Doris Herrmann; Philippe Barre; Sylvain Santoni; Bernadette Julier
Journal:  Theor Appl Genet       Date:  2010-05-16       Impact factor: 5.699

2.  Bayesian estimation of marker dosage in sugarcane and other autopolyploids.

Authors:  Peter Baker; Phillip Jackson; Karen Aitken
Journal:  Theor Appl Genet       Date:  2010-02-25       Impact factor: 5.699

Review 3.  Improving breeding efficiency in potato using molecular and quantitative genetics.

Authors:  Anthony T Slater; Noel O I Cogan; Benjamin J Hayes; Lee Schultz; M Finlay B Dale; Glenn J Bryan; John W Forster
Journal:  Theor Appl Genet       Date:  2014-09-04       Impact factor: 5.699

4.  The Double-Reduction Landscape in Tetraploid Potato as Revealed by a High-Density Linkage Map.

Authors:  Peter M Bourke; Roeland E Voorrips; Richard G F Visser; Chris Maliepaard
Journal:  Genetics       Date:  2015-09-15       Impact factor: 4.562

5.  Genetic map of the primocane-fruiting and thornless traits of tetraploid blackberry.

Authors:  P Castro; E T Stafne; J R Clark; K S Lewers
Journal:  Theor Appl Genet       Date:  2013-07-16       Impact factor: 5.699

6.  An expressed sequence tag SSR map of tetraploid alfalfa (Medicago sativa L.).

Authors:  M K Sledge; I M Ray; G Jiang
Journal:  Theor Appl Genet       Date:  2005-08-02       Impact factor: 5.699

7.  Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations.

Authors:  Chenxi Zhou; Bode Olukolu; Dorcus C Gemenet; Shan Wu; Wolfgang Gruneberg; Minh Duc Cao; Zhangjun Fei; Zhao-Bang Zeng; Andrew W George; Awais Khan; G Craig Yencho; Lachlan J M Coin
Journal:  Nat Genet       Date:  2020-10-30       Impact factor: 38.330

8.  A QTL that confers resistance to Colorado potato beetle (Leptinotarsa decemlineata [Say]) in tetraploid potato populations segregating for leptine.

Authors:  Boris Sagredo; N Balbyshev; A Lafta; H Casper; J Lorenzen
Journal:  Theor Appl Genet       Date:  2009-08-20       Impact factor: 5.699

9.  Genetic characterization and mapping of major gene resistance to potato leafroll virus in Solanumtuberosum ssp. andigena.

Authors:  A C Velásquez; E Mihovilovich; M Bonierbale
Journal:  Theor Appl Genet       Date:  2007-02-16       Impact factor: 5.699

10.  Genetic mapping with an inbred line-derived F2 population in potato.

Authors:  Jeffrey B Endelman; Shelley H Jansky
Journal:  Theor Appl Genet       Date:  2016-02-05       Impact factor: 5.699
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