Literature DB >> 12914082

Functional characterization of heme proteins encapsulated in wet nanoporous silica gels.

S Abbruzzetti1, C Viappiani, S Bruno, S Bettati, M Bonaccio, A Mozzarelli.   

Abstract

Myoglobin and hemoglobin were encapsulated in wet, nanoporous silica gels. A rigorous evaluation of the effect of the encapsulation on protein dynamics and function was carried out by measuring the kinetics of carbon monoxide rebinding after nanosecond laser flash-photolysis with transient absorption detection, and the oxygen affinity with absorption microspectrophotometry. The time course of carbon monoxide binding to myoglobin evidenced a strongly enhanced geminate recombination and a faster bimolecular rebinding with respect to solution, whereas T and R quaternary states of hemoglobin exhibited a geminate phase and a bimolecular binding rate very similar to those observed in solution. Oxygen affinity of T-state hemoglobin was found to be close to that observed for the binding of the first oxygen to T-state hemoglobin in solution. Results indicate that some conformational transitions are kinetically restricted, allowing to isolate distinct tertiary and quaternary states. This opens the way to their detailed functional characterization and application to biodevices.

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Year:  2001        PMID: 12914082     DOI: 10.1166/jnn.2001.058

Source DB:  PubMed          Journal:  J Nanosci Nanotechnol        ISSN: 1533-4880


  8 in total

1.  Dynamics of green fluorescent protein mutant2 in solution, on spin-coated glasses, and encapsulated in wet silica gels.

Authors:  Giuseppe Chirico; Fabio Cannone; Sabrina Beretta; Alberto Diaspro; Barbara Campanini; Stefano Bettati; Roberta Ruotolo; Andrea Mozzarelli
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

2.  Unfolding of Green Fluorescent Protein mut2 in wet nanoporous silica gels.

Authors:  Barbara Campanini; Sara Bologna; Fabio Cannone; Giuseppe Chirico; Andrea Mozzarelli; Stefano Bettati
Journal:  Protein Sci       Date:  2005-03-31       Impact factor: 6.725

Review 3.  Ligand recombination and a hierarchy of solvent slaved dynamics: the origin of kinetic phases in hemeproteins.

Authors:  Uri Samuni; David Dantsker; Camille J Roche; Joel M Friedman
Journal:  Gene       Date:  2007-05-10       Impact factor: 3.688

4.  Tertiary and quaternary allostery in tetrameric hemoglobin from Scapharca inaequivalvis.

Authors:  Luca Ronda; Stefano Bettati; Eric R Henry; Tara Kashav; Jeffrey M Sanders; William E Royer; Andrea Mozzarelli
Journal:  Biochemistry       Date:  2013-03-15       Impact factor: 3.162

5.  NO reactions with sol-gel and solution phase samples of the ferric nitrite derivative of HbA.

Authors:  Camille J Roche; Joel M Friedman
Journal:  Nitric Oxide       Date:  2009-11-15       Impact factor: 4.427

6.  Ligation tunes protein reactivity in an ancient haemoglobin: kinetic evidence for an allosteric mechanism in Methanosarcina acetivorans protoglobin.

Authors:  Stefania Abbruzzetti; Lesley Tilleman; Stefano Bruno; Cristiano Viappiani; Filip Desmet; Sabine Van Doorslaer; Massimo Coletta; Chiara Ciaccio; Paolo Ascenzi; Marco Nardini; Martino Bolognesi; Luc Moens; Sylvia Dewilde
Journal:  PLoS One       Date:  2012-03-27       Impact factor: 3.240

Review 7.  From protein structure to function via single crystal optical spectroscopy.

Authors:  Luca Ronda; Stefano Bruno; Stefano Bettati; Paola Storici; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2015-04-28

8.  CO rebinding kinetics and molecular dynamics simulations highlight dynamic regulation of internal cavities in human cytoglobin.

Authors:  Matteo Gabba; Stefania Abbruzzetti; Francesca Spyrakis; Flavio Forti; Stefano Bruno; Andrea Mozzarelli; F Javier Luque; Cristiano Viappiani; Pietro Cozzini; Marco Nardini; Francesca Germani; Martino Bolognesi; Luc Moens; Sylvia Dewilde
Journal:  PLoS One       Date:  2013-01-04       Impact factor: 3.240

  8 in total

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