Literature DB >> 12904578

The crystal structure of polygalacturonase-inhibiting protein (PGIP), a leucine-rich repeat protein involved in plant defense.

A Di Matteo1, L Federici, B Mattei, G Salvi, K A Johnson, C Savino, G De Lorenzo, D Tsernoglou, F Cervone.   

Abstract

Polygalacturonase-inhibiting proteins (PGIPs) are plant cell wall proteins that protect plants from fungal invasion. They interact with endopolygalacturonases secreted by phytopathogenic fungi, inhibit their enzymatic activity, and favor the accumulation of oligogalacturonides, which activate plant defense responses. PGIPs are members of the leucine-rich repeat (LRR) protein family that in plants play crucial roles in development, defense against pathogens, and recognition of beneficial microbes. Here we report the crystal structure at 1.7-A resolution of a PGIP from Phaseolus vulgaris. The structure is characterized by the presence of two beta-sheets instead of the single one originally predicted by modeling studies. The structure also reveals a negatively charged surface on the LRR concave face, likely involved in binding polygalacturonases. The structural information on PGIP provides a basis for designing more efficient inhibitors for plant protection.

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Year:  2003        PMID: 12904578      PMCID: PMC187787          DOI: 10.1073/pnas.1733690100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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Authors:  B A Schulman; A C Carrano; P D Jeffrey; Z Bowen; E R Kinnucan; M S Finnin; S J Elledge; J W Harper; M Pagano; N P Pavletich
Journal:  Nature       Date:  2000-11-16       Impact factor: 49.962

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Authors:  H Wu; M W Maciejewski; A Marintchev; S E Benashski; G P Mullen; S M King
Journal:  Nat Struct Biol       Date:  2000-07

Review 3.  Putting knowledge of plant disease resistance genes to work.

Authors:  J D Jones
Journal:  Curr Opin Plant Biol       Date:  2001-08       Impact factor: 7.834

4.  The specificity of polygalacturonase-inhibiting protein (PGIP): a single amino acid substitution in the solvent-exposed beta-strand/beta-turn region of the leucine-rich repeats (LRRs) confers a new recognition capability.

Authors:  F Leckie; B Mattei; C Capodicasa; A Hemmings; L Nuss; B Aracri; G De Lorenzo; F Cervone
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

5.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

6.  Structural diversity of leucine-rich repeat proteins.

Authors:  A V Kajava
Journal:  J Mol Biol       Date:  1998-04-03       Impact factor: 5.469

7.  Initiation of RPS2-specified disease resistance in Arabidopsis is coupled to the AvrRpt2-directed elimination of RIN4.

Authors:  Michael J Axtell; Brian J Staskawicz
Journal:  Cell       Date:  2003-02-07       Impact factor: 41.582

8.  Mechanism of ribonuclease inhibition by ribonuclease inhibitor protein based on the crystal structure of its complex with ribonuclease A.

Authors:  B Kobe; J Deisenhofer
Journal:  J Mol Biol       Date:  1996-12-20       Impact factor: 5.469

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  Tandemly duplicated Arabidopsis genes that encode polygalacturonase-inhibiting proteins are regulated coordinately by different signal transduction pathways in response to fungal infection.

Authors:  Simone Ferrari; Donatella Vairo; Frederick M Ausubel; Felice Cervone; Giulia De Lorenzo
Journal:  Plant Cell       Date:  2003-01       Impact factor: 11.277

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  73 in total

1.  Characterization of the complex locus of bean encoding polygalacturonase-inhibiting proteins reveals subfunctionalization for defense against fungi and insects.

Authors:  Renato D'Ovidio; Alessandro Raiola; Cristina Capodicasa; Alessandra Devoto; Daniela Pontiggia; Serena Roberti; Roberta Galletti; Eric Conti; Donal O'Sullivan; Giulia De Lorenzo
Journal:  Plant Physiol       Date:  2004-08-06       Impact factor: 8.340

2.  Structure-function analysis of cf-9, a receptor-like protein with extracytoplasmic leucine-rich repeats.

Authors:  Renier A L van der Hoorn; Brande B H Wulff; Susana Rivas; Marcus C Durrant; Anke van der Ploeg; Pierre J G M de Wit; Jonathan D G Jones
Journal:  Plant Cell       Date:  2005-02-18       Impact factor: 11.277

Review 3.  Ribonuclease inhibitor: structure and function.

Authors:  Kimberly A Dickson; Marcia C Haigis; Ronald T Raines
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2005

4.  Polygalacturonase-inhibiting protein interacts with pectin through a binding site formed by four clustered residues of arginine and lysine.

Authors:  Sara Spadoni; Olga Zabotina; Adele Di Matteo; Jørn Dalgaard Mikkelsen; Felice Cervone; Giulia De Lorenzo; Benedetta Mattei; Daniela Bellincampi
Journal:  Plant Physiol       Date:  2006-04-28       Impact factor: 8.340

5.  Integration of evolutionary and desolvation energy analysis identifies functional sites in a plant immunity protein.

Authors:  Manuela Casasoli; Luca Federici; Francesco Spinelli; Adele Di Matteo; Nicoletta Vella; Flavio Scaloni; Juan Fernandez-Recio; Felice Cervone; Giulia De Lorenzo
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-16       Impact factor: 11.205

6.  Repressing the expression of the SUCROSE NONFERMENTING-1-RELATED PROTEIN KINASE gene in pea embryo causes pleiotropic defects of maturation similar to an abscisic acid-insensitive phenotype.

Authors:  Ruslana Radchuk; Volodymyr Radchuk; Winfriede Weschke; Ljudmilla Borisjuk; Hans Weber
Journal:  Plant Physiol       Date:  2005-12-16       Impact factor: 8.340

Review 7.  Receptor-mediated signalling in plants: molecular patterns and programmes.

Authors:  Mahmut Tör; Michael T Lotze; Nicholas Holton
Journal:  J Exp Bot       Date:  2009-07-23       Impact factor: 6.992

8.  Identification of I-7 expands the repertoire of genes for resistance to Fusarium wilt in tomato to three resistance gene classes.

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Journal:  Mol Plant Pathol       Date:  2015-09-18       Impact factor: 5.663

9.  The bean polygalacturonase-inhibiting protein 2 (PvPGIP2) is highly conserved in common bean (Phaseolus vulgaris L.) germplasm and related species.

Authors:  Anna Farina; Valentina Rocchi; Michela Janni; Stefano Benedettelli; Giulia De Lorenzo; Renato D'Ovidio
Journal:  Theor Appl Genet       Date:  2009-02-24       Impact factor: 5.699

10.  Mapping glycans onto specific N-linked glycosylation sites of Pyrus communis PGIP redefines the interface for EPG-PGIP interactions.

Authors:  Jae-Min Lim; Kazuhiro Aoki; Peggi Angel; Derek Garrison; Daniel King; Michael Tiemeyer; Carl Bergmann; Lance Wells
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

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