Literature DB >> 12900546

Antisense regulation in X inactivation and autosomal imprinting.

Y Ogawa1, J T Lee.   

Abstract

The regulation of epigenetic phenomena by elements encoding antisense RNA's is one of the most rapidly emerging themes in mammalian gene expression. Such regulation is epitomized by X chromosome inactivation (XCI) and autosomal imprinting. In XCI, TSIX serves as an antisense regulator of XIST, the silencer element for XCI which itself makes a non-coding transcript. Numerous antisense transcripts have also been discovered in autosomally imprinted loci, including the IGF2R/AIR locus, the Prader-Willi/Angelman Syndrome (PWS/AS) locus, and the Beckwith-Wiedemann Syndrome (BWS) locus. How these antisense elements regulate XCI and imprinting remains unsolved. However, various structural and functional similarities among them imply the possibility of shared mechanism. Among the most interesting are the antagonistic relationship between sense and antisense loci and the initiation of antisense transcripts within imprinting centers. This article reviews the latest developments in antisense regulation in XCI and autosomal imprinting and speculates on molecular means by which antisense genes can regulate silencing in mammals. Copyright 2002 S. Karger AG, Basel

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Year:  2002        PMID: 12900546     DOI: 10.1159/000071575

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  14 in total

Review 1.  Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms.

Authors:  Michal Lapidot; Yitzhak Pilpel
Journal:  EMBO Rep       Date:  2006-12       Impact factor: 8.807

2.  Tsix-mediated epigenetic switch of a CTCF-flanked region of the Xist promoter determines the Xist transcription program.

Authors:  Pablo Navarro; Damian R Page; Philip Avner; Claire Rougeulle
Journal:  Genes Dev       Date:  2006-10-15       Impact factor: 11.361

3.  Naturally occurring antisense: transcriptional leakage or real overlap?

Authors:  Dvir Dahary; Orna Elroy-Stein; Rotem Sorek
Journal:  Genome Res       Date:  2005-02-14       Impact factor: 9.043

Review 4.  Regulation of estrogen receptor beta activity and implications in health and disease.

Authors:  Elin Swedenborg; Krista A Power; Wen Cai; Ingemar Pongratz; Joëlle Rüegg
Journal:  Cell Mol Life Sci       Date:  2009-12       Impact factor: 9.261

5.  Regulation of fibroblast growth factor-2 by an endogenous antisense RNA and by argonaute-2.

Authors:  Leigh-Ann MacFarlane; Ying Gu; Alan G Casson; Paul R Murphy
Journal:  Mol Endocrinol       Date:  2010-03-02

6.  Elongation of the Kcnq1ot1 transcript is required for genomic imprinting of neighboring genes.

Authors:  Debora Mancini-Dinardo; Scott J S Steele; John M Levorse; Robert S Ingram; Shirley M Tilghman
Journal:  Genes Dev       Date:  2006-05-15       Impact factor: 11.361

7.  MicroRNA-directed transcriptional gene silencing in mammalian cells.

Authors:  Daniel H Kim; Pål Saetrom; Ola Snøve; John J Rossi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-13       Impact factor: 11.205

Review 8.  Genomic landscape of developing male germ cells.

Authors:  Tin-Lap Lee; Alan Lap-Yin Pang; Owen M Rennert; Wai-Yee Chan
Journal:  Birth Defects Res C Embryo Today       Date:  2009-03

9.  Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns.

Authors:  Oleg V Grinchuk; Piroon Jenjaroenpun; Yuriy L Orlov; Jiangtao Zhou; Vladimir A Kuznetsov
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

Review 10.  Silencing by imprinted noncoding RNAs: is transcription the answer?

Authors:  Florian M Pauler; Martha V Koerner; Denise P Barlow
Journal:  Trends Genet       Date:  2007-04-18       Impact factor: 11.639

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