Literature DB >> 12874376

A grafting approach to obtain site-specific metal-binding properties of EF-hand proteins.

Yiming Ye1, Sarah Shealy, Hsiau-Wei Lee, Ivan Torshin, Robert Harrison, Jenny J Yang.   

Abstract

The EF-hand calcium-binding loop III from calmodulin was inserted with glycine linkers into the scaffold protein CD2.D1 at three locations to study site-specific calcium binding properties of EF-hand motifs. After insertion, the host protein retains its native structure and forms a 1:1 metal-protein complex for calcium and its analog, lanthanum. Tyrosine-sensitized Tb3+ energy transfer exhibits metal binding and La3+ and Ca2+ compete for the metal binding site. The grafted EF-loop III in different environments has similar La3+ binding affinities, suggesting that it is largely solvated and functions independently from the host protein.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12874376     DOI: 10.1093/protein/gzg051

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  13 in total

1.  Elucidation of a novel extracellular calcium-binding site on metabotropic glutamate receptor 1{alpha} (mGluR1{alpha}) that controls receptor activation.

Authors:  Yusheng Jiang; Yun Huang; Hing-Cheung Wong; Yubin Zhou; Xue Wang; Jun Yang; Randy A Hall; Edward M Brown; Jenny J Yang
Journal:  J Biol Chem       Date:  2010-08-12       Impact factor: 5.157

2.  Engineered lanthanide-binding metallohomeodomains: designing folded chimeras by modular turn substitution.

Authors:  Sunghyuk Lim; Sonya J Franklin
Journal:  Protein Sci       Date:  2006-09       Impact factor: 6.725

3.  Protein grabs a ligand by extending anchor residues: molecular simulation for Ca2+ binding to calmodulin loop.

Authors:  Chigusa Kobayashi; Shoji Takada
Journal:  Biophys J       Date:  2006-02-10       Impact factor: 4.033

4.  Identification and dissection of Ca(2+)-binding sites in the extracellular domain of Ca(2+)-sensing receptor.

Authors:  Yun Huang; Yubin Zhou; Wei Yang; Robert Butters; Hsiau-Wei Lee; Shunyi Li; Adriana Castiblanco; Edward M Brown; Jenny J Yang
Journal:  J Biol Chem       Date:  2007-05-03       Impact factor: 5.157

5.  OptGraft: A computational procedure for transferring a binding site onto an existing protein scaffold.

Authors:  Hossein Fazelinia; Patrick C Cirino; Costas D Maranas
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

6.  Protein-based MRI contrast agents for molecular imaging of prostate cancer.

Authors:  Lixia Wei; Shunyi Li; Jianhua Yang; Yiming Ye; Jin Zou; Liya Wang; Robert Long; Omar Zurkiya; Tiejun Zhao; Julian Johnson; Jingjuan Qiao; Wangda Zhou; Adriana Castiblanco; Natalie Maor; Yanyi Chen; Hui Mao; Xiaoping Hu; Jenny J Yang; Zhi-Ren Liu
Journal:  Mol Imaging Biol       Date:  2011-06       Impact factor: 3.488

Review 7.  Calciomics: integrative studies of Ca2+-binding proteins and their interactomes in biological systems.

Authors:  Yubin Zhou; Shenghui Xue; Jenny J Yang
Journal:  Metallomics       Date:  2013-01       Impact factor: 4.526

8.  Identification of a Ca2+-binding domain in the rubella virus nonstructural protease.

Authors:  Yubin Zhou; Wen-Pin Tzeng; Wei Yang; Yumei Zhou; Yiming Ye; Hsiau-wei Lee; Teryl K Frey; Jenny Yang
Journal:  J Virol       Date:  2007-05-02       Impact factor: 5.103

9.  Calciomics: prediction and analysis of EF-hand calcium binding proteins by protein engineering.

Authors:  Chen Yanyi; Xue Shenghui; Zhou Yubin; Yang Jenny Jie
Journal:  Sci China Chem       Date:  2010-01-01       Impact factor: 9.445

10.  New structural and functional contexts of the Dx[DN]xDG linear motif: insights into evolution of calcium-binding proteins.

Authors:  Daniel J Rigden; Duncan D Woodhead; Prudence W H Wong; Michael Y Galperin
Journal:  PLoS One       Date:  2011-06-24       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.