Literature DB >> 12873213

Conservation of the syntenies between porcine chromosome 7 and human chromosomes 6, 14 and 15 demonstrated by radiation hybrid mapping and linkage analysis.

M Tanaka1, T Matsumoto, S Yanai, M Domukai, D Toki, T Hayashi, S Kiuchi, H Yasue, H Uenishi, E Kobayashi, T Awata.   

Abstract

Comparative mapping studies facilitate the identification of genes located in quantitative trait locus (QTL) regions in domestic animals by utilizing information from the human genome. Radiation hybrid (RH) mapping is effective for this purpose because of its high resolution in ordered gene mapping on chromosomes. We constructed an RH map of pig chromosome 7, by adding 23 markers associated with genes. This RH map clearly demonstrated the mosaic of homology between pig chromosome 7 (SSC7) and human chromosomes 6, 14 and 15 at a 'gene' level, and was confirmed by linkage analysis. Clarification of the homology of SSC7 to human chromosomes will contribute to the elucidation of the gene(s) responsible for QTL detected on this chromosome.

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Year:  2003        PMID: 12873213     DOI: 10.1046/j.1365-2052.2003.00999.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  5 in total

1.  A new 4016-marker radiation hybrid map for porcine-human genome analysis.

Authors:  Noriyuki Hamasima; Ayumi Mikawa; Hideaki Suzuki; Kohei Suzuki; Hirohide Uenishi; Takashi Awata
Journal:  Mamm Genome       Date:  2008-01-11       Impact factor: 2.957

2.  A physical map of large segments of pig chromosome 7q11-q14: comparative analysis with human chromosome 6p21.

Authors:  Angela Barbosa; Olivier Demeure; Céline Urien; Denis Milan; Patrick Chardon; Christine Renard
Journal:  Mamm Genome       Date:  2004-12       Impact factor: 2.957

3.  Molecular characterization, expression profile and association analysis with fat deposition traits of the porcine APOM gene.

Authors:  Gang Pan; Yayuan Fu; Bo Zuo; Zhuqing Ren; Dequan Xu; Minggang Lei; Rong Zheng; Yuan-Zhu Xiong
Journal:  Mol Biol Rep       Date:  2009-03-27       Impact factor: 2.316

4.  Localization, expression change in PRRSV infection and association analysis of the porcine TAP1 gene.

Authors:  Nunu Sun; Dewu Liu; Hongbo Chen; Xiangdong Liu; Fanming Meng; Xianwei Zhang; Huiyong Chen; Shengsong Xie; Xinyun Li; Zhenfang Wu
Journal:  Int J Biol Sci       Date:  2011-11-17       Impact factor: 6.580

5.  High resolution physical map of porcine chromosome 7 QTL region and comparative mapping of this region among vertebrate genomes.

Authors:  Julie Demars; Juliette Riquet; Katia Feve; Mathieu Gautier; Mireille Morisson; Olivier Demeure; Christine Renard; Patrick Chardon; Denis Milan
Journal:  BMC Genomics       Date:  2006-01-24       Impact factor: 3.969

  5 in total

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