Literature DB >> 12869712

An in vivo dual-luciferase assay system for studying translational recoding in the yeast Saccharomyces cerevisiae.

Jason W Harger1, Jonathan D Dinman.   

Abstract

A new in vivo assay system has been developed to study programmed frameshifting in the yeast Saccharomyces cerevisiae. Frameshift signals are inserted between the Renilla and firefly luciferase reporter genes contained in a yeast expression vector and the two activities are directly measured from cell lysates in one tube. Similar to other bicistronic reporter systems, this one allows the efficient estimation of recoding efficiency by comparison of the normalized activity ratios from each luciferase protein. The assay system has been applied to HIV-1 and L-A directed programmed -1 frameshifting and Ty1 and Ty3 directed +1 frameshifting. The assay system is amenable to high-throughput screening.

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Year:  2003        PMID: 12869712      PMCID: PMC1236998          DOI: 10.1261/rna.5930803

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  19 in total

1.  Nonsense-mediated decay mutants do not affect programmed -1 frameshifting.

Authors:  L Bidou; G Stahl; I Hatin; O Namy; J P Rousset; P J Farabaugh
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

2.  The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure.

Authors:  Jonathan D Dinman; Sara Richter; Ewan P Plant; Ronald C Taylor; Amy B Hammell; Tariq M Rana
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

3.  Genetic Control of Biochemical Reactions in Neurospora.

Authors:  G W Beadle; E L Tatum
Journal:  Proc Natl Acad Sci U S A       Date:  1941-11-15       Impact factor: 11.205

Review 4.  Recoding: dynamic reprogramming of translation.

Authors:  R F Gesteland; J F Atkins
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

5.  A dual-luciferase reporter system for studying recoding signals.

Authors:  G Grentzmann; J A Ingram; P J Kelly; R F Gesteland; J F Atkins
Journal:  RNA       Date:  1998-04       Impact factor: 4.942

6.  Two chromosomal genes required for killing expression in killer strains of Saccharomyces cerevisiae.

Authors:  R B Wickner; M J Leibowitz
Journal:  Genetics       Date:  1976-03-25       Impact factor: 4.562

Review 7.  Nonsense-mediated mRNA decay in Saccharomyces cerevisiae.

Authors:  C I González; A Bhattacharya; W Wang; S W Peltz
Journal:  Gene       Date:  2001-08-22       Impact factor: 3.688

8.  A -1 ribosomal frameshift in a double-stranded RNA virus of yeast forms a gag-pol fusion protein.

Authors:  J D Dinman; T Icho; R B Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-01       Impact factor: 11.205

9.  Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds.

Authors:  D Mumberg; R Müller; M Funk
Journal:  Gene       Date:  1995-04-14       Impact factor: 3.688

Review 10.  Translating old drugs into new treatments: ribosomal frameshifting as a target for antiviral agents.

Authors:  J D Dinman; M J Ruiz-Echevarria; S W Peltz
Journal:  Trends Biotechnol       Date:  1998-04       Impact factor: 19.536

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  100 in total

Review 1.  Targeting frameshifting in the human immunodeficiency virus.

Authors:  Léa Brakier-Gingras; Johanie Charbonneau; Samuel E Butcher
Journal:  Expert Opin Ther Targets       Date:  2012-03       Impact factor: 6.902

2.  A programmed -1 ribosomal frameshift signal can function as a cis-acting mRNA destabilizing element.

Authors:  Ewan P Plant; Pinger Wang; Jonathan L Jacobs; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2004-02-03       Impact factor: 16.971

3.  Dual luciferase assay system for rapid assessment of gene expression in Saccharomyces cerevisiae.

Authors:  David S McNabb; Robin Reed; Robert A Marciniak
Journal:  Eukaryot Cell       Date:  2005-09

4.  An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome.

Authors:  Rasa Rakauskaite; Jonathan D Dinman
Journal:  Mol Cell Biol       Date:  2006-09-25       Impact factor: 4.272

5.  Ribosomal protein L3: gatekeeper to the A site.

Authors:  Arturas Meskauskas; Jonathan D Dinman
Journal:  Mol Cell       Date:  2007-03-23       Impact factor: 17.970

6.  Communication between RACK1/Asc1 and uS3 (Rps3) is essential for RACK1/Asc1 function in yeast Saccharomyces cerevisiae.

Authors:  Nishant Singh; Supriya Jindal; Arnab Ghosh; Anton A Komar
Journal:  Gene       Date:  2019-05-01       Impact factor: 3.688

7.  Propagation of Saccharomyces cerevisiae [PSI+] prion is impaired by factors that regulate Hsp70 substrate binding.

Authors:  Gary Jones; Youtao Song; Seyung Chung; Daniel C Masison
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

8.  Independent regulation of Hsp70 and Hsp90 chaperones by Hsp70/Hsp90-organizing protein Sti1 (Hop1).

Authors:  Youtao Song; Daniel C Masison
Journal:  J Biol Chem       Date:  2005-08-12       Impact factor: 5.157

9.  RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs.

Authors:  Dori M Landry; Marla I Hertz; Sunnie R Thompson
Journal:  Genes Dev       Date:  2009-12-01       Impact factor: 11.361

10.  Evidence against a direct role for the Upf proteins in frameshifting or nonsense codon readthrough.

Authors:  Jason W Harger; Jonathan D Dinman
Journal:  RNA       Date:  2004-09-23       Impact factor: 4.942

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