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Literature DB >> 12855462

GeneLoc: exon-based integration of human genome maps.

Naomi Rosen¹, Vered Chalifa-Caspi, Orit Shmueli, Avital Adato, Michal Lapidot, Julie Stampnitzky, Marilyn Safran, Doron Lancet.

Abstract

MOTIVATION: Despite the numerous available whole-genome mapping resources, no comprehensive, integrated map of the human genome yet exists.
RESULTS: GeneLoc, software adjunct to GeneCards and UDB, integrates gene lists by comparing genomic coordinates at the exon level and assigns unique and meaningful identifiers to each gene.

Entities: Species

Mesh：

Year: 2003 PMID： 12855462 DOI： 10.1093/bioinformatics/btg1030

Source DB: PubMed Journal: Bioinformatics ISSN： 1367-4803 Impact factor: 6.937

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Cited

12 in total

1. Adenosine A1 receptor gene variants associated with post-traumatic seizures after severe TBI.

Authors: Amy K Wagner; Megan A Miller; Joelle Scanlon; Dianxu Ren; Patrick M Kochanek; Yvette P Conley
Journal: Epilepsy Res Date: 2010-07-06 Impact factor: 3.045

2. GeneCards Version 3: the human gene integrator.

Authors: Marilyn Safran; Irina Dalah; Justin Alexander; Naomi Rosen; Tsippi Iny Stein; Michael Shmoish; Noam Nativ; Iris Bahir; Tirza Doniger; Hagit Krug; Alexandra Sirota-Madi; Tsviya Olender; Yaron Golan; Gil Stelzer; Arye Harel; Doron Lancet
Journal: Database (Oxford) Date: 2010-08-05 Impact factor: 3.451

3. A family with combined mutations of the hemophilia A and X-linked adrenoleukodystrophy genes.

Authors: Brent L Fogel; Pari Young; Arthur R Thompson; Susan Perlman
Journal: Neurogenetics Date: 2008-05-15 Impact factor: 2.660

4. In-silico human genomics with GeneCards.

Authors: Gil Stelzer; Irina Dalah; Tsippi Iny Stein; Yigeal Satanower; Naomi Rosen; Noam Nativ; Danit Oz-Levi; Tsviya Olender; Frida Belinky; Iris Bahir; Hagit Krug; Paul Perco; Bernd Mayer; Eugene Kolker; Marilyn Safran; Doron Lancet
Journal: Hum Genomics Date: 2011-10 Impact factor: 4.639

5. Integrative analysis of epigenetics data identifies gene-specific regulatory elements.

Authors: Florian Schmidt; Alexander Marx; Nina Baumgarten; Marie Hebel; Martin Wegner; Manuel Kaulich; Matthias S Leisegang; Ralf P Brandes; Jonathan Göke; Jilles Vreeken; Marcel H Schulz
Journal: Nucleic Acids Res Date: 2021-10-11 Impact factor: 16.971

6. GeneTide--Terra Incognita Discovery Endeavor: a new transcriptome focused member of the GeneCards/GeneNote suite of databases.

Authors: Maxim Shklar; Liora Strichman-Almashanu; Orit Shmueli; Michael Shmoish; Marilyn Safran; Doron Lancet
Journal: Nucleic Acids Res Date: 2005-01-01 Impact factor: 16.971

GeneLoc: exon-based integration of human genome maps.

1. Adenosine A1 receptor gene variants associated with post-traumatic seizures after severe TBI.

2. GeneCards Version 3: the human gene integrator.

3. A family with combined mutations of the hemophilia A and X-linked adrenoleukodystrophy genes.

4. In-silico human genomics with GeneCards.

5. Integrative analysis of epigenetics data identifies gene-specific regulatory elements.

6. GeneTide--Terra Incognita Discovery Endeavor: a new transcriptome focused member of the GeneCards/GeneNote suite of databases.

7. Rational confederation of genes and diseases: NGS interpretation via GeneCards, MalaCards and VarElect.

8. GeneHancer: genome-wide integration of enhancers and target genes in GeneCards.

9. GIFtS: annotation landscape analysis with GeneCards.

10. Personal receptor repertoires: olfaction as a model.