Literature DB >> 12853133

Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes.

Josep M Casacuberta1, Néstor Santiago.   

Abstract

Transposons are genetic elements that can move, and sometimes spread, within genomes, and that constitute an important fraction of eukaryote genomes. Two types of transposons, long terminal repeat (LTR)-retrotransposons and miniature inverted-repeat transposable elements (MITEs), are highly represented in plant genomes, and can account for as much as 50-80% of the total DNA content. In the last few years it has been shown that, in spite of their mutagenic capacity, both LTR-retrotransposons and MITEs can be found associated to genes, suggesting that their activity has influenced the evolution of plant genes. In this review we will summarise recent data on the control of the activity and the impact of both LTR-retrotransposons and MITEs on the evolution of plant genes and genomes.

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Year:  2003        PMID: 12853133     DOI: 10.1016/s0378-1119(03)00557-2

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  76 in total

1.  A single-base substitution suppresses flower color mutation caused by a novel miniature inverted-repeat transposable element in gentian.

Authors:  Masahiro Nishihara; Takashi Hikage; Eri Yamada; Takashi Nakatsuka
Journal:  Mol Genet Genomics       Date:  2011-10-15       Impact factor: 3.291

2.  Ttd1a promoter is involved in DNA-protein binding by salt and light stresses.

Authors:  Pasqualina Woodrow; Giovanni Pontecorvo; Loredana F Ciarmiello; Amodio Fuggi; Petronia Carillo
Journal:  Mol Biol Rep       Date:  2010-11-23       Impact factor: 2.316

3.  RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome.

Authors:  E Alves; I Ballesteros; R Linacero; A M Vázquez
Journal:  Theor Appl Genet       Date:  2005-06-10       Impact factor: 5.699

4.  Characterization of terminal-repeat retrotransposon in miniature (TRIM) in Brassica relatives.

Authors:  Tae-Jin Yang; Soo-Jin Kwon; Beom-Soon Choi; Jung Sun Kim; Mina Jin; Ki-Byung Lim; Jee Young Park; Jin-A Kim; Myung-Ho Lim; Ho-Il Kim; Hyo-Jin Lee; Yong Pyo Lim; Andrew H Paterson; Beom-Seok Park
Journal:  Theor Appl Genet       Date:  2006-12-09       Impact factor: 5.699

5.  Sequence heterogeneity of the envelope-like domain in cultivated allotetraploid Gossypium species and their diploid progenitors.

Authors:  E E Hafez; A A Abdel Ghany; A H Paterson; E A Zaki
Journal:  J Appl Genet       Date:  2009       Impact factor: 3.240

6.  Different strategies to persist: the pogo-like Lemi1 transposon produces miniature inverted-repeat transposable elements or typical defective elements in different plant genomes.

Authors:  Hélène Guermonprez; Céline Loot; Josep M Casacuberta
Journal:  Genetics       Date:  2008-08-30       Impact factor: 4.562

7.  PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements in the ciliate Paramecium tetraurelia.

Authors:  Céline Baudry; Sophie Malinsky; Matthieu Restituito; Aurélie Kapusta; Sarah Rosa; Eric Meyer; Mireille Bétermier
Journal:  Genes Dev       Date:  2009-11-01       Impact factor: 11.361

8.  Distribution dynamics of the Tnt1 retrotransposon in tobacco.

Authors:  Quang Hien Le; Delphine Melayah; Eric Bonnivard; Maud Petit; Marie-Angèle Grandbastien
Journal:  Mol Genet Genomics       Date:  2007-09-01       Impact factor: 3.291

9.  The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences.

Authors:  Naxin Huo; Gerard R Lazo; John P Vogel; Frank M You; Yaqin Ma; Daniel M Hayden; Devin Coleman-Derr; Theresa A Hill; Jan Dvorak; Olin D Anderson; Ming-Cheng Luo; Yong Q Gu
Journal:  Funct Integr Genomics       Date:  2007-11-06       Impact factor: 3.410

10.  Genomic microstructure and differential expression of the genes encoding UDP-glucose:sinapate glucosyltransferase (UGT84A9) in oilseed rape (Brassica napus).

Authors:  Juliane Mittasch; Sabine Mikolajewski; Frank Breuer; Dieter Strack; Carsten Milkowski
Journal:  Theor Appl Genet       Date:  2010-01-20       Impact factor: 5.699

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